I performed the following command and came across an issue as below. DRAM-v.py annotate -i vs2-pass2/for-dramv/final-viral-combined-for-dramv.fa -v vs2-pass2/for-dramv/viral-affi-contigs-for-dramv.tab -o dramv-annotate --skip_trnascan --threads 32 . Could you help on this matter? Thanks!
Traceback (most recent call last):
File "/home/ecovir/anaconda3/envs/vs2/bin/DRAM-v.py", line 161, in
args.func(**args_dict)
File "/home/ecovir/anaconda3/envs/vs2/lib/python3.10/site-packages/mag_annotator/annotate_vgfs.py", line 451, in annotate_vgfs
virsorter_hits = get_virsorter_hits(virsorter_affi_contigs)
File "/home/ecovir/anaconda3/envs/vs2/lib/python3.10/site-packages/mag_annotator/annotate_vgfs.py", line 152, in get_virsorter_hits
raise ValueError('FASTA headers must not have = or ; before the first space (%s). To run DRAM-v you must '
ValueError: FASTA headers must not have = or ; before the first space (contig=k141.44326_flag=1_coverage=6.5532_length=1175__full). To run DRAM-v you must rerun VIRSorter with = and ; removed from the headers or run DRAM-v.py remove_bad_characters and then rerun DRAM-v
I performed the following command and came across an issue as below. DRAM-v.py annotate -i vs2-pass2/for-dramv/final-viral-combined-for-dramv.fa -v vs2-pass2/for-dramv/viral-affi-contigs-for-dramv.tab -o dramv-annotate --skip_trnascan --threads 32 . Could you help on this matter? Thanks!
Traceback (most recent call last): File "/home/ecovir/anaconda3/envs/vs2/bin/DRAM-v.py", line 161, in
args.func(**args_dict)
File "/home/ecovir/anaconda3/envs/vs2/lib/python3.10/site-packages/mag_annotator/annotate_vgfs.py", line 451, in annotate_vgfs
virsorter_hits = get_virsorter_hits(virsorter_affi_contigs)
File "/home/ecovir/anaconda3/envs/vs2/lib/python3.10/site-packages/mag_annotator/annotate_vgfs.py", line 152, in get_virsorter_hits
raise ValueError('FASTA headers must not have = or ; before the first space (%s). To run DRAM-v you must '
ValueError: FASTA headers must not have = or ; before the first space (contig=k141.44326_flag=1_coverage=6.5532_length=1175__full). To run DRAM-v you must rerun VIRSorter with = and ; removed from the headers or run DRAM-v.py remove_bad_characters and then rerun DRAM-v