I am using DRAM version 1.4.6 and trying to set up the database.
I was running DRAM-setup.py prepare_databases --output_dir DRAM_data and encountered the following errors:
2023-09-23 06:20:38,159 - The subcommand ['mmseqs', 'createindex', 'DRAM_data/uniref90.20230923.mmsdb', 'DRAM_data/tmp', '--threads', '10'] experienced an error: Can not write to data file DRAM_data/uniref90.20230923.mmsdb.idx.14
site-packages/mag_annotator/utils.py", line 71, in run_process
raise subprocess.SubprocessError(f"The subcommand {' '.join(command)} experienced an error, see the log for more info.")
subprocess.SubprocessError: The subcommand mmseqs createindex DRAM_data/uniref90.20230923.mmsdb DRAM_data/tmp --threads 10 experienced an error, see the log for more info.
DRAM/lib/python3.8/site-packages/mag_annotator/database_handler.py:123: UserWarning: Database does not exist at path None
warnings.warn("Database does not exist at path %s" % description_loc)
Hi,
I am using DRAM version 1.4.6 and trying to set up the database.
I was running DRAM-setup.py prepare_databases --output_dir DRAM_data and encountered the following errors:
2023-09-23 06:20:38,159 - The subcommand ['mmseqs', 'createindex', 'DRAM_data/uniref90.20230923.mmsdb', 'DRAM_data/tmp', '--threads', '10'] experienced an error: Can not write to data file DRAM_data/uniref90.20230923.mmsdb.idx.14
site-packages/mag_annotator/utils.py", line 71, in run_process raise subprocess.SubprocessError(f"The subcommand {' '.join(command)} experienced an error, see the log for more info.") subprocess.SubprocessError: The subcommand mmseqs createindex DRAM_data/uniref90.20230923.mmsdb DRAM_data/tmp --threads 10 experienced an error, see the log for more info.
DRAM/lib/python3.8/site-packages/mag_annotator/database_handler.py:123: UserWarning: Database does not exist at path None warnings.warn("Database does not exist at path %s" % description_loc)