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WrightonLabCSU / DRAM

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
GNU General Public License v3.0
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Need help in preparation of database #344

Closed sahilrishav2 closed 1 month ago

sahilrishav2 commented 2 months ago

Hello,

I am preparing the database using DRAM-setup.py prepare_databases --output_dir DRAM_data --threads 40 . All databases were downloaded successfully and processed also but in the end, it got killed:

2024-04-26 22:59:52,920 - Moved peptidase to final destination, configuration updated 2024-04-26 22:59:52,925 - Moved genome_summary_form to final destination, configuration updated 2024-04-26 22:59:52,930 - Moved module_step_form to final destination, configuration updated 2024-04-26 22:59:52,936 - Moved function_heatmap_form to final destination, configuration updated 2024-04-26 22:59:52,941 - Moved amg_database to final destination, configuration updated 2024-04-26 22:59:52,947 - Moved etc_module_database to final destination, configuration updated 2024-04-26 22:59:52,947 - Populating the description db, this may take some time Killed

Now, I want to ask, how to perform this last step only Populating the description db, this may take some time not the entire process as other processes have been completed.

Thank you