CNAM-328 Instantly build charts for fall study stats

[Vishy26]

The script fall_main_study creates flowcharts for the fall study using the filepaths for the Metadata, Flowchart_json, the output directory and the Molecular_mapping_csv in case of Pharmaceutical stats. Supporting functions have also been added.

[codecov[bot]]

Codecov Report

Merging #157 into master will decrease coverage by 0.89%. The diff coverage is n/a.

@@           Coverage Diff            @@
##           master    #157     +/-   ##
========================================
- Coverage    94.8%   93.9%   -0.9%     
========================================
  Files         133     132      -1     
  Lines        1539    1543      +4     
  Branches       53      50      -3     
========================================
- Hits         1459    1449     -10     
- Misses         80      94     +14

Impacted Files	Coverage Δ
...cmap/cnam/etl/transformers/follow_up/Columns.scala	6.25% <0%> (-23.17%)	:arrow_down:
...map/cnam/etl/filters/PatientFiltersImplicits.scala	97.29% <0%> (ø)	:arrow_up:
...p/cnam/study/pioglitazone/PioglitazoneConfig.scala	100% <0%> (ø)	:arrow_up:
...nique/cmap/cnam/etl/sources/data/McoCeSource.scala	100% <0%> (ø)	:arrow_up:
.../polytechnique/cmap/cnam/etl/sources/Sources.scala	100% <0%> (ø)	:arrow_up:
...hnique/cmap/cnam/etl/sources/data/DcirSource.scala	100% <0%> (ø)	:arrow_up:
...chnique/cmap/cnam/etl/sources/data/McoSource.scala	100% <0%> (ø)	:arrow_up:
...cmap/cnam/etl/sources/data/DataSourceManager.scala
...map/cnam/etl/transformers/follow_up/FollowUp.scala	25% <0%> (+25%)	:arrow_up:

---

Continue to review full report at Codecov.

Legend - Click here to learn more Δ = absolute <relative> (impact), ø = not affected, ? = missing data Powered by Codecov. Last update 6c382c1...977a032. Read the comment docs.