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XZouProjects / OGFSC_matlab

Performs optimized gene filtering for single-cell RNA-seq data
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Error in readChar(con, 5L, useBytes = TRUE) : cannot open the connection #1

Open hejian41 opened 5 years ago

hejian41 commented 5 years ago

Hi, thanks for OGFSC package! I tried to excute the function OGFSC( ) in the demo code, and encountered this error. Trackback results showed "TW_trace_ratio_threshold {OGFSC} For Internal Use Only“, which led to this error. Is there a way to get the function avaliable?

Thank u!

XZouProjects commented 5 years ago

Thanks for your interest.

This function has been included in the OGFSC package, you do not need to install it separately. You may try to follow the instruction to install the OGFSC R package first.

Xin

发自我的 iPhone

在 2018年12月5日，下午10:38，hejian notifications@github.com<mailto:notifications@github.com> 写道：

Hi, thanks for OGFSC package! I tried to excute the function OGFSC( ) in the demo code, and encountered this error. Trackback results showed "TW_trace_ratio_threshold {OGFSC} For Internal Use Only“, which led to this error. Is there a way to get the function avaliable?

Thank u!

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHubhttps://github.com/XZouProjects/OGFSC/issues/1, or mute the threadhttps://github.com/notifications/unsubscribe-auth/AQ0Qxmw18R_PjaDwpcHMyMURod4qDjI0ks5u19pGgaJpZM4ZC3AD.

hejian41 commented 5 years ago

@XZouProjects Thanks for your reply. I downloaded the OGFSC_0.1.0.tar.gz ,and installed it with R CMD INSTALL in different PCs. Then I tried to run the OGFSC_demo.R as instructed, but the error still occured. Would you mind email the package.tar.gz to me(hejian41@163.com) for excluding unknown errors in the download process?

The argumant "LR_thresholds" in demo.R has been updated to "alpha" actually.

Thanks very much!