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XiaoTaoWang / HiCLift

A fast and efficient tool for converting chromatin interaction data between genome assemblies
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custom chromosome #2

Open imerelli opened 2 years ago

imerelli commented 2 years ago

Hi, your tool is very nice and works smoothly using standard genomes (I'm converting juicer hic files from hg19 to hg38). But I have custom experiments with an extra chromosome, which clearly must not be changed during h19 to hg38 conversion. I have an error because I guess the software is not able to manage this. Is there a workaround to this? Maybe with a small modification of the code? Ivan

XiaoTaoWang commented 2 years ago

Hi, Ivan, thanks for your interest. Can you share the error message with me?