Hi. Very useful tool.
I'm trying to plot an assembly, but I only want to plot the genes involved in the neo loops. I tried to manually add them to the filter_ parameter of plot_genes, but some of them overlap unlike when plotting all the genes. It seems like setting the filter_ parameter somehow messes up the row in which they have to be plotted. Can this be fixed? Also, is there any function to get the list of genes affected by these neo loops?
Thank you!
Hi. Very useful tool. I'm trying to plot an assembly, but I only want to plot the genes involved in the neo loops. I tried to manually add them to the
filter_parameter ofplot_genes, but some of them overlap unlike when plotting all the genes. It seems like setting thefilter_parameter somehow messes up the row in which they have to be plotted. Can this be fixed? Also, is there any function to get the list of genes affected by these neo loops? Thank you!