EricKutschera
commented
1 year ago The workflow looks like it failed on: rule write_param_file which is the first rule that tried to use the conda environment. There should be an error message in one of the log files for that job: results/NEPC_test/write_param_file_log.out or results/NEPC_test/write_param_file_log.err
The install log shows that the conda install failed to find compatible packages. It has this line:
Note that strict channel priority may have removed packages required for satisfiability.
You could try running conda config --show-sources to see if any of your config files are forcing strict channel priority
clin888
Hi Eric,
I am new to this software. Here are my log files. Please help. Thanks
.snakemake\log
Building DAG of jobs... Using shell: /bin/bash Provided cluster nodes: 100 Job stats: job count min threads max threads
all 1 1 1 copy_splice_matrix_files 1 1 1 count_iris_predict_tasks 1 1 1 download_reference_file 2 1 1 iris_append_sjc 1 1 1 iris_epitope_post 1 1 1 iris_predict 1 1 1 iris_screen 1 1 1 iris_visual_summary 1 1 1 unzip_reference_file 2 1 1 write_param_file 1 1 1 total 13 1 1
Select jobs to execute...
[Mon Jun 19 16:52:29 2023] localrule copy_splice_matrix_files: input: /home/clin/IRIS/example/splicing_matrix/splicing_matrix.SE.cov10.NEPC_example.txt, /home/clin/IRIS/example/splicing_matrix/splicing_matrix.SE.cov10.NEPC_example.txt.idx output: /home/clin/IRIS/IRIS_data/db/NEPC_test/splicing_matrix/splicing_matrix.SE.cov10.NEPC_test.txt, /home/clin/IRIS/IRIS_data/db/NEPC_test/splicing_matrix/splicing_matrix.SE.cov10.NEPC_test.txt.idx jobid: 10 reason: Missing output files: /home/clin/IRIS/IRIS_data/db/NEPC_test/splicing_matrix/splicing_matrix.SE.cov10.NEPC_test.txt.idx, /home/clin/IRIS/IRIS_data/db/NEPC_test/splicing_matrix/splicing_matrix.SE.cov10.NEPC_test.txt resources: mem_mb=1000, disk_mb=1000, tmpdir=/tmp
cp /home/clin/IRIS/example/splicing_matrix/splicing_matrix.SE.cov10.NEPC_example.txt /home/clin/IRIS/IRIS_data/db/NEPC_test/splicing_matrix/splicing_matrix.SE.cov10.NEPC_test.txt && cp /home/clin/IRIS/example/splicing_matrix/splicing_matrix.SE.cov10.NEPC_example.txt.idx /home/clin/IRIS/IRIS_data/db/NEPC_test/splicing_matrix/splicing_matrix.SE.cov10.NEPC_test.txt.idx
[Mon Jun 19 16:52:29 2023] rule download_reference_file: output: references/gencode.v26lift37.annotation.gtf.gz log: references/download_reference_file_gencode.v26lift37.annotation.gtf.gz_log.out, references/download_reference_file_gencode.v26lift37.annotation.gtf.gz_log.err jobid: 9 reason: Missing output files: references/gencode.v26lift37.annotation.gtf.gz wildcards: file_name=gencode.v26lift37.annotation.gtf.gz resources: mem_mb=4096, disk_mb=1000, tmpdir=, time_hours=12
curl -L 'ftp://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release_26/GRCh37_mapping/gencode.v26lift37.annotation.gtf.gz' -o references/gencode.v26lift37.annotation.gtf.gz 1> references/download_reference_file_gencode.v26lift37.annotation.gtf.gz_log.out 2> references/download_reference_file_gencode.v26lift37.annotation.gtf.gz_log.err Submitted job 9 with external jobid '22798875'.
[Mon Jun 19 16:52:29 2023] rule download_reference_file: output: references/ucsc.hg19.fasta.gz log: references/download_reference_file_ucsc.hg19.fasta.gz_log.out, references/download_reference_file_ucsc.hg19.fasta.gz_log.err jobid: 6 reason: Missing output files: references/ucsc.hg19.fasta.gz wildcards: file_name=ucsc.hg19.fasta.gz resources: mem_mb=4096, disk_mb=1000, tmpdir=, time_hours=12
curl -L 'http://hgdownload.soe.ucsc.edu/goldenPath/hg19/bigZips/hg19.fa.gz' -o references/ucsc.hg19.fasta.gz 1> references/download_reference_file_ucsc.hg19.fasta.gz_log.out 2> references/download_reference_file_ucsc.hg19.fasta.gz_log.err Submitted job 6 with external jobid '22798876'. [Mon Jun 19 16:52:30 2023] Finished job 10. 1 of 13 steps (8%) done Waiting at most 60 seconds for missing files. [Mon Jun 19 16:52:59 2023] Finished job 9. 2 of 13 steps (15%) done Select jobs to execute...
[Mon Jun 19 16:52:59 2023] rule unzip_reference_file: input: references/gencode.v26lift37.annotation.gtf.gz output: references/gencode.v26lift37.annotation.gtf log: references/unzip_reference_file_gencode.v26lift37.annotation.gtf_log.out, references/unzip_reference_file_gencode.v26lift37.annotation.gtf_log.err jobid: 8 reason: Missing output files: references/gencode.v26lift37.annotation.gtf; Input files updated by another job: references/gencode.v26lift37.annotation.gtf.gz wildcards: file_name=gencode.v26lift37.annotation.gtf resources: mem_mb=4096, disk_mb=1000, tmpdir=, time_hours=12
gunzip -c references/gencode.v26lift37.annotation.gtf.gz 1> references/gencode.v26lift37.annotation.gtf 2> references/unzip_reference_file_gencode.v26lift37.annotation.gtf_log.err Submitted job 8 with external jobid '22798927'. Waiting at most 60 seconds for missing files. [Mon Jun 19 16:53:29 2023] Finished job 8. 3 of 13 steps (23%) done [Mon Jun 19 16:53:31 2023] Finished job 6. 4 of 13 steps (31%) done Select jobs to execute...
[Mon Jun 19 16:53:31 2023] rule unzip_reference_file: input: references/ucsc.hg19.fasta.gz output: references/ucsc.hg19.fasta log: references/unzip_reference_file_ucsc.hg19.fasta_log.out, references/unzip_reference_file_ucsc.hg19.fasta_log.err jobid: 5 reason: Missing output files: references/ucsc.hg19.fasta; Input files updated by another job: references/ucsc.hg19.fasta.gz wildcards: file_name=ucsc.hg19.fasta resources: mem_mb=4096, disk_mb=1810, tmpdir=, time_hours=12
gunzip -c references/ucsc.hg19.fasta.gz 1> references/ucsc.hg19.fasta 2> references/unzip_reference_file_ucsc.hg19.fasta_log.err Submitted job 5 with external jobid '22798968'. [Mon Jun 19 16:54:01 2023] Finished job 5. 5 of 13 steps (38%) done Select jobs to execute...
[Mon Jun 19 16:54:01 2023] rule write_param_file: input: references/ucsc.hg19.fasta output: results/NEPC_test/screen.para log: results/NEPC_test/write_param_file_log.out, results/NEPC_test/write_param_file_log.err jobid: 4 reason: Missing output files: results/NEPC_test/screen.para; Input files updated by another job: references/ucsc.hg19.fasta resources: mem_mb=4096, disk_mb=6103, tmpdir=, time_hours=12
/home/clin/IRIS/conda_wrapper /home/clin/IRIS/conda_env_3 python scripts/write_param_file.py --out-path results/NEPC_test/screen.para --group-name NEPC_test --iris-db /home/clin/IRIS/IRIS_data/db --psi-p-value-cutoffs ,,0.01 --sjc-p-value-cutoffs ,,0.000001 --delta-psi-cutoffs ,,0.05 --fold-change-cutoffs ,,1 --group-count-cutoffs ,,8 --reference-names-tissue-matched-normal '' --reference-names-tumor '' --reference-names-normal GTEx_Heart,GTEx_Blood,GTEx_Lung,GTEx_Liver,GTEx_Brain,GTEx_Nerve,GTEx_Muscle,GTEx_Spleen,GTEx_Thyroid,GTEx_Skin,GTEx_Kidney --comparison-mode group --statistical-test-type parametric --mapability-bigwig /home/clin/IRIS/IRIS_data/resources/mappability/wgEncodeCrgMapabilityAlign24mer.bigWig --reference-genome references/ucsc.hg19.fasta 1> results/NEPC_test/write_param_file_log.out 2> results/NEPC_test/write_param_file_log.err Submitted job 4 with external jobid '22799008'. [Mon Jun 19 16:54:11 2023] Error in rule write_param_file: jobid: 4 output: results/NEPC_test/screen.para log: results/NEPC_test/write_param_file_log.out, results/NEPC_test/write_param_file_log.err (check log file(s) for error message) shell: /home/clin/IRIS/conda_wrapper /home/clin/IRIS/conda_env_3 python scripts/write_param_file.py --out-path results/NEPC_test/screen.para --group-name NEPC_test --iris-db /home/clin/IRIS/IRIS_data/db --psi-p-value-cutoffs ,,0.01 --sjc-p-value-cutoffs ,,0.000001 --delta-psi-cutoffs ,,0.05 --fold-change-cutoffs ,,1 --group-count-cutoffs ,,8 --reference-names-tissue-matched-normal '' --reference-names-tumor '' --reference-names-normal GTEx_Heart,GTEx_Blood,GTEx_Lung,GTEx_Liver,GTEx_Brain,GTEx_Nerve,GTEx_Muscle,GTEx_Spleen,GTEx_Thyroid,GTEx_Skin,GTEx_Kidney --comparison-mode group --statistical-test-type parametric --mapability-bigwig /home/clin/IRIS/IRIS_data/resources/mappability/wgEncodeCrgMapabilityAlign24mer.bigWig --reference-genome references/ucsc.hg19.fasta 1> results/NEPC_test/write_param_file_log.out 2> results/NEPC_test/write_param_file_log.err (one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!) cluster_jobid: 22799008
Error executing rule write_param_file on cluster (jobid: 4, external: 22799008, jobscript: /home/clin/IRIS/.snakemake/tmp.7v6mkgax/snakejob.write_param_file.4.sh). For error details see the cluster log and the log files of the involved rule(s). Trying to restart job 4. Select jobs to execute...
[Mon Jun 19 16:54:11 2023] rule write_param_file: input: references/ucsc.hg19.fasta output: results/NEPC_test/screen.para log: results/NEPC_test/write_param_file_log.out, results/NEPC_test/write_param_file_log.err jobid: 4 reason: Missing output files: results/NEPC_test/screen.para; Input files updated by another job: references/ucsc.hg19.fasta resources: mem_mb=4096, disk_mb=6103, tmpdir=, time_hours=12
/home/clin/IRIS/conda_wrapper /home/clin/IRIS/conda_env_3 python scripts/write_param_file.py --out-path results/NEPC_test/screen.para --group-name NEPC_test --iris-db /home/clin/IRIS/IRIS_data/db --psi-p-value-cutoffs ,,0.01 --sjc-p-value-cutoffs ,,0.000001 --delta-psi-cutoffs ,,0.05 --fold-change-cutoffs ,,1 --group-count-cutoffs ,,8 --reference-names-tissue-matched-normal '' --reference-names-tumor '' --reference-names-normal GTEx_Heart,GTEx_Blood,GTEx_Lung,GTEx_Liver,GTEx_Brain,GTEx_Nerve,GTEx_Muscle,GTEx_Spleen,GTEx_Thyroid,GTEx_Skin,GTEx_Kidney --comparison-mode group --statistical-test-type parametric --mapability-bigwig /home/clin/IRIS/IRIS_data/resources/mappability/wgEncodeCrgMapabilityAlign24mer.bigWig --reference-genome references/ucsc.hg19.fasta 1> results/NEPC_test/write_param_file_log.out 2> results/NEPC_test/write_param_file_log.err Submitted job 4 with external jobid '22799023'. [Mon Jun 19 16:54:22 2023] Error in rule write_param_file: jobid: 4 output: results/NEPC_test/screen.para log: results/NEPC_test/write_param_file_log.out, results/NEPC_test/write_param_file_log.err (check log file(s) for error message) shell: /home/clin/IRIS/conda_wrapper /home/clin/IRIS/conda_env_3 python scripts/write_param_file.py --out-path results/NEPC_test/screen.para --group-name NEPC_test --iris-db /home/clin/IRIS/IRIS_data/db --psi-p-value-cutoffs ,,0.01 --sjc-p-value-cutoffs ,,0.000001 --delta-psi-cutoffs ,,0.05 --fold-change-cutoffs ,,1 --group-count-cutoffs ,,8 --reference-names-tissue-matched-normal '' --reference-names-tumor '' --reference-names-normal GTEx_Heart,GTEx_Blood,GTEx_Lung,GTEx_Liver,GTEx_Brain,GTEx_Nerve,GTEx_Muscle,GTEx_Spleen,GTEx_Thyroid,GTEx_Skin,GTEx_Kidney --comparison-mode group --statistical-test-type parametric --mapability-bigwig /home/clin/IRIS/IRIS_data/resources/mappability/wgEncodeCrgMapabilityAlign24mer.bigWig --reference-genome references/ucsc.hg19.fasta 1> results/NEPC_test/write_param_file_log.out 2> results/NEPC_test/write_param_file_log.err (one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!) cluster_jobid: 22799023
Error executing rule write_param_file on cluster (jobid: 4, external: 22799023, jobscript: /home/clin/IRIS/.snakemake/tmp.7v6mkgax/snakejob.write_param_file.4.sh). For error details see the cluster log and the log files of the involved rule(s). Shutting down, this might take some time. Exiting because a job execution failed. Look above for error message Complete log: .snakemake/log/2023-06-19T165228.360928.snakemake.log
install_log
Package libgcc conflicts for: r-base==3.4.1 -> libgcc seaborn==0.9.0 -> scipy[version='>=0.15.2'] -> libgcc seq2hla==2.2 -> bowtie==1.1.2 -> libgcc statsmodels==0.10.2 -> scipy[version='>=0.14'] -> libgcc
Package _openmp_mutex conflicts for: r-base==3.4.1 -> libgcc-ng[version='>=4.9'] -> _openmp_mutex[version='>=4.5'] rmats==4.1.2 -> libgcc-ng[version='>=10.3.0'] -> _openmp_mutex star==2.7.10b -> libgcc-ng[version='>=12'] -> _openmp_mutex[version='>=4.5'] python=2.7 -> libgcc-ng[version='>=7.3.0'] -> _openmp_mutex[version='>=4.5'] rmats==4.1.2 -> _openmp_mutex[version='>=4.5'] scipy==1.2.0 -> libgcc-ng[version='>=7.3.0'] -> _openmp_mutex[version='|>=4.5',build=_llvm] pysam==0.15.4 -> libgcc-ng[version='>=7.3.0'] -> _openmp_mutex[version='>=4.5'] seq2hla==2.2 -> r-base -> _openmp_mutex bedtools==2.29.0 -> libgcc-ng[version='>=7.3.0'] -> _openmp_mutex[version='>=4.5'] pybigwig==0.3.13 -> libgcc-ng[version='>=7.3.0'] -> _openmp_mutex[version='>=4.5'] numpy==1.16.5 -> libgcc-ng[version='>=9.3.0'] -> _openmp_mutex[version='|>=4.5',build=_llvm] statsmodels==0.10.2 -> libgcc-ng[version='>=7.3.0'] -> _openmp_mutex[version='>=4.5']
Package xz conflicts for: r-base==3.4.1 -> cairo[version='>=1.14.12,<2.0.0a0'] -> xz[version='5.0.|>=5.2.10,<6.0a0|>=5.2.3,<6.0a0|>=5.2.4,<6.0a0|>=5.2.6,<6.0a0|>=5.2.6,<5.3.0a0|>=5.2.5,<5.3.0a0|>=5.2.4,<5.3.0a0|>=5.2.5,<6.0a0|>=5.2.8,<6.0a0'] bedtools==2.29.0 -> xz[version='>=5.2.4,<5.3.0a0'] r-base==3.4.1 -> xz[version='5.2.|>=5.2.3,<5.3.0a0'] rmats==4.1.2 -> python[version='>=3.9,<3.10.0a0'] -> xz[version='5.2.|>=5.2.10,<6.0a0|>=5.2.5,<5.3.0a0|>=5.2.6,<6.0a0|>=5.4.2,<6.0a0|>=5.2.8,<6.0a0|>=5.2.5,<6.0a0|>=5.2.4,<5.3.0a0|>=5.2.4,<6.0a0|>=5.2.6,<5.3.0a0|>=5.2.3,<5.3.0a0|>=5.2.3,<6.0a0'] pysam==0.15.4 -> python[version='>=3.6,<3.7.0a0'] -> xz[version='5.2.|>=5.2.3,<5.3.0a0|>=5.2.5,<6.0a0|>=5.2.4,<6.0a0|>=5.2.3,<6.0a0|>=5.2.10,<6.0a0|>=5.2.6,<6.0a0'] statsmodels==0.10.2 -> python[version='>=3.6,<3.7.0a0'] -> xz[version='5.2.|>=5.2.3,<5.3.0a0|>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0|>=5.2.5,<6.0a0|>=5.2.4,<6.0a0|>=5.2.3,<6.0a0|>=5.2.6,<6.0a0|>=5.4.2,<6.0a0|>=5.2.10,<6.0a0'] star==2.7.10b -> htslib[version='>=1.17,<1.18.0a0'] -> xz[version='>=5.2.6,<5.3.0a0|>=5.2.6,<6.0a0'] seaborn==0.9.0 -> python -> xz[version='5.0.|5.2.|>=5.2.3,<5.3.0a0|>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0|>=5.2.6,<5.3.0a0|>=5.2.6,<6.0a0|>=5.4.2,<6.0a0|>=5.2.10,<6.0a0|>=5.2.8,<6.0a0|>=5.2.5,<6.0a0|>=5.2.4,<6.0a0|>=5.2.3,<6.0a0'] pysam==0.15.4 -> xz[version='>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0'] scipy==1.2.0 -> python[version='>=3.7,<3.8.0a0'] -> xz[version='5.2.|>=5.2.10,<6.0a0|>=5.2.3,<5.3.0a0|>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0|>=5.2.6,<6.0a0|>=5.2.5,<6.0a0|>=5.2.4,<6.0a0|>=5.2.3,<6.0a0'] numpy==1.16.5 -> python[version='>=3.7,<3.8.0a0'] -> xz[version='5.2.|>=5.2.10,<6.0a0|>=5.2.3,<5.3.0a0|>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0|>=5.2.6,<6.0a0|>=5.2.5,<6.0a0|>=5.2.4,<6.0a0|>=5.4.2,<6.0a0|>=5.2.3,<6.0a0'] cufflinks==2.2.1 -> python[version='>=3.5,<3.6.0a0'] -> xz[version='5.0.|5.2.|>=5.2.3,<5.3.0a0|>=5.2.5,<6.0a0|>=5.2.4,<6.0a0|>=5.2.3,<6.0a0|>=5.2.5,<5.3.0a0|>=5.2.4,<5.3.0a0'] seq2hla==2.2 -> r-base -> xz[version='5.2.|>=5.2.3,<5.3.0a0|>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0|>=5.2.6,<6.0a0|>=5.2.5,<6.0a0|>=5.2.4,<6.0a0|>=5.2.3,<6.0a0'] pybigwig==0.3.13 -> python[version='>=3.6,<3.7.0a0'] -> xz[version='5.0.|5.2.|>=5.2.3,<5.3.0a0|>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0|>=5.2.5,<6.0a0|>=5.2.4,<6.0a0|>=5.2.3,<6.0a0|>=5.2.10,<6.0a0|>=5.2.6,<6.0a0']
Package intel-openmp conflicts for: seaborn==0.9.0 -> scipy[version='>=0.15.2'] -> intel-openmp[version='>=2021.4.0,<2022.0a0|>=2023.1.0,<2024.0a0'] statsmodels==0.10.2 -> scipy[version='>=0.14'] -> intel-openmp[version='>=2021.4.0,<2022.0a0|>=2023.1.0,<2024.0a0'] numpy==1.16.5 -> mkl[version='>=2019.4,<2021.0a0'] -> intel-openmp scipy==1.2.0 -> mkl[version='>=2019.1,<2021.0a0'] -> intel-openmp
Package llvm-openmp conflicts for: numpy==1.16.5 -> mkl[version='>=2019.4,<2021.0a0'] -> llvm-openmp[version='>=10.0.0|>=11.0.0|>=9.0.1|>=16.0.5|>=14.0.4|>=13.0.1|>=12.0.1|>=11.1.0|>=11.0.1|>=16.0.1|>=10.0.1'] rmats==4.1.2 -> _openmp_mutex[version='>=4.5'] -> llvm-openmp[version='>=9.0.1'] scipy==1.2.0 -> blas=[build=openblas] -> llvm-openmp[version='>=10.0.0|>=11.0.0|>=11.0.1|>=11.1.0|>=12.0.1|>=13.0.1|>=14.0.4|>=16.0.5|>=9.0.1|>=16.0.1|>=10.0.1']
Package readline conflicts for: python=2.7 -> sqlite[version='>=3.30.1,<4.0a0'] -> readline[version='>=8.1,<9.0a0|>=8.1.2,<9.0a0|>=8.2,<9.0a0'] python=2.7 -> readline[version='6.2.|7.0|7.0.|>=7.0,<8.0a0|>=8.0,<9.0a0|7.*']
Package liblapacke conflicts for: numpy==1.16.5 -> blas=[build=openblas] -> liblapacke[version='3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.9.0|3.9.0|3.9.0|3.9.0',build='0_openblas|8_openblas|12_openblas|13_openblas|15_openblas|16_openblas|17_openblas|10_openblas|11_linux64_openblas|12_linux64_openblas|14_linux64_openblas|15_linux64_openblas|16_linux64_openblas|17_linux64_openblas|13_linux64_openblas|9_openblas|8_openblas|7_openblas|6_openblas|5_openblas|14_openblas|11_openblas|10_openblas|9_openblas|7_openblas|6_openblas|5_openblas|4_openblas|3_openblas|2_openblas'] scipy==1.2.0 -> blas=[build=openblas] -> liblapacke[version='3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.9.0|3.9.0|3.9.0|3.9.0',build='0_openblas|8_openblas|12_openblas|13_openblas|15_openblas|16_openblas|17_openblas|10_openblas|11_linux64_openblas|12_linux64_openblas|14_linux64_openblas|15_linux64_openblas|16_linux64_openblas|17_linux64_openblas|13_linux64_openblas|9_openblas|8_openblas|7_openblas|6_openblas|5_openblas|14_openblas|11_openblas|10_openblas|9_openblas|7_openblas|6_openblas|5_openblas|4_openblas|3_openblas|2_openblas']
Package statsmodels conflicts for: statsmodels==0.10.2 seaborn==0.9.0 -> statsmodels[version='>=0.5.0']
Package libgcc-ng conflicts for: python=2.7 -> openssl[version='>=1.1.1a,<1.1.2a'] -> libgcc-ng[version='>=10.3.0|>=12|>=9.4.0|>=9.3.0|>=7.5.0'] python=2.7 -> libgcc-ng[version='>=11.2.0|>=4.9|>=7.3.0|>=7.2.0']
Package zlib conflicts for: python=2.7 -> sqlite[version='>=3.30.1,<4.0a0'] -> zlib[version='>=1.2.12,<1.3.0a0|>=1.2.13,<2.0a0'] python=2.7 -> zlib[version='1.2.|1.2.11|1.2.11.|>=1.2.11,<1.3.0a0|1.2.8|>=1.2.13,<1.3.0a0']
Package libstdcxx-ng conflicts for: python=2.7 -> ncurses[version='>=6.1,<7.0.0a0'] -> libstdcxx-ng[version='>=11.2.0|>=7.5.0|>=9.4.0'] python=2.7 -> libstdcxx-ng[version='>=4.9|>=7.3.0|>=7.2.0']
Package star conflicts for: rmats==4.1.2 -> star[version='>=2.5'] star==2.7.10b
Package ncurses conflicts for: python=2.7 -> readline[version='>=8.0,<9.0a0'] -> ncurses[version='5.9|>=6.2,<7.0.0a0|>=6.4,<7.0a0'] python=2.7 -> ncurses[version='5.9.|>=6.1,<7.0.0a0|>=6.3,<7.0a0|>=6.2,<7.0a0|>=6.1,<7.0a0|>=6.0,<7.0a0|6.0.']The following specifications were found to be incompatible with your system:
Your installed version is: 2.27
Note that strict channel priority may have removed packages required for satisfiability.