Xinglab / IRIS

IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
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Use translate module alone #25

Open beaferbl opened 3 months ago

beaferbl commented 3 months ago

Hi, I want to use the translate module directly over a list of rMATS events from some previous analyses. I am able to translate the events that are annotated, but not those contaning novelSS. I see that the input for the translate module is the ouput from screening_novelss, right? However, I am encountering many errors trying to run the pipeline from format + screening_novelss, so I was wondering if you could explain the format of as_input for IRIS translate including novelss. Thank you, Bea