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Xinglab / IRIS

IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
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Update README, parameters, and install script #5

Closed EricKutschera closed 1 year ago

ypnngaa-py commented 1 year ago

Eric, everything looks good. Should we do a squash and merge instead of rebase and merge as several of my commits are separated but for the same task?

Here is my summary of these update:

  1. Update conda requirements
  2. Remove the note in README about the old R version
  3. Update README to a) add diagram and description for CPM-based screen; b) update IEDB link c) update naming and option for blocklist and MS functions d) update the manuscript title and contact e) other typo fixes
  4. Install samtools to a new conda env
EricKutschera commented 1 year ago

Hi Yang, doing a squash and merge sounds good to me. And the summary looks good too

ypnngaa-py commented 1 year ago

Great. Please merge it with the master as the release V2.0.1. Thanks so much!

On Tue, May 16, 2023 at 11:20 AM Eric Kutschera @.***> wrote:

Hi Yang, doing a squash and merge sounds good to me. And the summary looks good too

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EricKutschera commented 1 year ago

I added 1 more commit to update the version numbers: https://github.com/Xinglab/IRIS/commit/598dad3346b4b594639b6e8c8292d934386580de

And I made a v2.0.1 release: https://github.com/Xinglab/IRIS/releases

ypnngaa-py commented 1 year ago

Great! Thanks for taking care of the package version and making the release!