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Mapping to transcriptome reference #36

Closed vetmohit89 closed 11 months ago

vetmohit89 commented 1 year ago

Hello Eric,

I am wondering if we can map reads to transcriptome reference file also for quantifying the isoforms using espresso?

Thank you Mohit

EricKutschera commented 1 year ago

ESPRESSO expects reads aligned to the genome as input. If the input reads are aligned to a transcriptome reference then I don't expect ESPRESSO to produce useful output