Yaml file not working in WSL

Hello, I was trying to create the SCAPTURE env with conda as per instructions, however the yaml file downloaded caused a lengthy error message from conda:

`# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<

Traceback (most recent call last):
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1129, in __call__
    return func(*args, **kwargs)
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/cli/main.py", line 80, in do_call
    exit_code = getattr(module, func_name)(args, parser)
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda/notices/core.py", line 72, in wrapper
    return_value = func(*args, **kwargs)
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/cli/main_create.py", line 103, in execute
    spec = specs.detect(name=name, filename=get_filename(args.file), directory=os.getcwd())
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/specs/__init__.py", line 47, in detect
    if spec.can_handle():
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/specs/yaml_file.py", line 19, in can_handle
    self._environment = env.from_file(self.filename)
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/env.py", line 169, in from_file
    return from_yaml(yamlstr, filename=filename)
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/env.py", line 143, in from_yaml
    data = yaml_safe_load(yamlstr)
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda/common/serialize.py", line 50, in yaml_safe_load
    return yaml.safe_load(string, version="1.2")
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/main.py", line 980, in safe_load
    return load(stream, SafeLoader, version)
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/main.py", line 935, in load
    return loader._constructor.get_single_data()
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/constructor.py", line 109, in get_single_data
    node = self.composer.get_single_node()
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/composer.py", line 78, in get_single_node
    document = self.compose_document()
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/composer.py", line 104, in compose_document
    self.parser.get_event()
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/parser.py", line 163, in get_event
    self.current_event = self.state()
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/parser.py", line 239, in parse_document_end
    token = self.scanner.peek_token()
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/scanner.py", line 182, in peek_token
    self.fetch_more_tokens()
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/scanner.py", line 282, in fetch_more_tokens
    return self.fetch_value()
  File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/scanner.py", line 651, in fetch_value
    raise ScannerError(
ruamel_yaml.scanner.ScannerError: mapping values are not allowed here
  in "<unicode string>", line 195, column 75:
     ... age-responsive" style="word-wrap: break-word;">
                                         ^ (line: 195)

$ /home/rbarb/anaconda3/bin/conda-env create -f SCAPTURE_env.yaml

environment variables: CIO_TEST= CONDA_AUTO_UPDATE_CONDA=false CONDA_DEFAULT_ENV=base CONDA_EXE=/home/rbarb/anaconda3/bin/conda CONDA_PREFIX=/home/rbarb/anaconda3 CONDA_PROMPT_MODIFIER=(base) CONDA_PYTHON_EXE=/home/rbarb/anaconda3/bin/python CONDA_ROOT=/home/rbarb/anaconda3 CONDA_SHLVL=1 CURL_CA_BUNDLE= PATH=/home/rbarb/.local/bin:/home/rbarb/.local/bin:/home/rbarb/anaconda3/bi n:/home/rbarb/anaconda3/condabin:/home/rbarb/.local/bin:/usr/local/sbi n:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/g ames:/usr/lib/wsl/lib:/mnt/c/Program Files (x86)/Common Files/Oracle/J ava/javapath:/mnt/c/windows/system32:/mnt/c/windows:/mnt/c/windows/Sys tem32/Wbem:/mnt/c/windows/System32/WindowsPowerShell/v1.0:/mnt/c/windo ws/System32/OpenSSH:/mnt/c/Program Files (x86)/NVIDIA Corporation/Phys X/Common:/mnt/c/WINDOWS/system32:/mnt/c/WINDOWS:/mnt/c/WINDOWS/System3 2/Wbem:/mnt/c/WINDOWS/System32/WindowsPowerShell/v1.0:/mnt/c/WINDOWS/S ystem32/OpenSSH:/mnt/c/Program Files/PuTTY:/mnt/c/Program Files/NVIDIA Corporation/NVIDIA NvDLISR:/mnt/c/WINDOWS/system32:/mnt/c/WINDOWS:/mnt /c/WINDOWS/System32/Wbem:/mnt/c/WINDOWS/System32/WindowsPowerShell/v1. 0:/mnt/c/WINDOWS/System32/OpenSSH:/mnt/c/Users/RBarbieri/AppData/Local /Microsoft/WindowsApps:/snap/bin REQUESTS_CA_BUNDLE= SSL_CERT_FILE=

 active environment : base
active env location : /home/rbarb/anaconda3
        shell level : 1
   user config file : /home/rbarb/.condarc

populated config files : /home/rbarb/.condarc conda version : 22.9.0 conda-build version : 3.24.0 python version : 3.9.7.final.0 virtual packages : cuda=12.2=0 linux=5.10.16.3=0 glibc=2.31=0 unix=0=0 __archspec=1=x86_64 base environment : /home/rbarb/anaconda3 (writable) conda av data dir : /home/rbarb/anaconda3/etc/conda conda av metadata url : None channel URLs : https://conda.anaconda.org/conda-forge/linux-64 https://conda.anaconda.org/conda-forge/noarch https://conda.anaconda.org/bioconda/linux-64 https://conda.anaconda.org/bioconda/noarch https://repo.anaconda.com/pkgs/main/linux-64 https://repo.anaconda.com/pkgs/main/noarch https://repo.anaconda.com/pkgs/r/linux-64 https://repo.anaconda.com/pkgs/r/noarch package cache : /home/rbarb/anaconda3/pkgs /home/rbarb/.conda/pkgs envs directories : /home/rbarb/anaconda3/envs /home/rbarb/.conda/envs platform : linux-64 user-agent : conda/22.9.0 requests/2.26.0 CPython/3.9.7 Linux/5.10.16.3-microsoft-standard-WSL2 ubuntu/20.04.4 glibc/2.31 UID:GID : 1000:1000 netrc file : None offline mode : False`

Anything that can be done about this?

Thank you in advance!

YangLab / SCAPTURE

Yaml file not working in WSL #12