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YangLabHKUST / STitch3D

Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices
https://stitch3d-tutorial.readthedocs.io/en/latest/index.html#
MIT License
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Can't find seurat_clust_1620.txt #15

Open Peter-Fung opened 1 year ago

Peter-Fung commented 1 year ago

Dear professor: I cannot find this txt file "seurat_clust_1620.txt" in example 3 "Run STitch3D on the Drosophila embryo dataset" clust = pd.read_csv("./data/Calderon_2022/seurat_clust_1620.txt", sep=" ") Could you tell me where I can download it?

gefeiwang commented 1 year ago

Hi there,

Thank you for your interest in our method. We have uploaded related files, including seurat_clust_1620.txt and cluster_anno_table.csv in this link.

Best, Gefei