YangLabHKUST / STitch3D

Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices
https://stitch3d-tutorial.readthedocs.io/en/latest/index.html#
MIT License
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How can I find "genes_new.txt" dataset? #8

Closed cristalliao closed 1 year ago

cristalliao commented 1 year ago

Dear Professor, I want to know where I can find this file "genes_new.txt" when I try this great STitch3D in Example 2. gene_new <- read.table("genes_new.txt", sep=",", header=TRUE) in this part "Run STitch3D on the human heart dataset" of 3D visualization of gene expression patterns Thanks in advance!

cristalliao commented 1 year ago

Is that genes_new = pd.read_csv("./Filtered/filtered_ST_matrix_and_meta_data/genes_new.txt")?