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YaqiangCao
/
cLoops
Accurate and flexible loops calling tool for 3D genomic data.
https://yaqiangcao.github.io/cLoops/
MIT License
109
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17
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Issue with file preprocessing.
#31
BlackPianoCat
closed
2 years ago
8
Loops Visualization
#30
yussufhajjaj
closed
3 years ago
4
using cloops from Juicer
#29
yamzaleg
closed
3 years ago
2
cLoops differential loop calling
#28
maharshi14
closed
3 years ago
1
call stripe example file has error
#26
runningsnail2333
closed
3 years ago
1
Extracting enrichment score from a matrix given a list of loops
#25
rikrdo89
closed
3 years ago
1
ERROR: no inter-ligation PETs detected for eps 5000 minPts 50,can't model the distance cutoff,continue anyway
#24
ysora
closed
3 years ago
17
hicpro2bedpe bug
#23
KunFang93
closed
4 years ago
9
How to plot the loops in WashU
#22
r78v10a07
closed
4 years ago
1
cLopps hang for more than 24 hours
#21
r78v10a07
closed
4 years ago
1
OpenSSL
#20
shakbarali
closed
4 years ago
1
Conda env create issue
#19
xinyangbing
closed
4 years ago
8
joblib error
#18
jessakay
closed
4 years ago
5
Distance cut-off
#17
jessakay
closed
4 years ago
2
tuning parameters for stripe calls ( callStripes )
#16
rikrdo89
closed
4 years ago
4
HiC input from TADbit
#15
bontus
closed
5 years ago
3
calling loops on a .hic file
#14
rikrdo89
closed
5 years ago
5
adjust parameters to increase/decrease stringency
#13
rikrdo89
closed
5 years ago
5
Some details about the parameter 'eps'
#12
Yulong663
closed
5 years ago
4
Input format
#11
Phlya
closed
5 years ago
1
ValueError: need at least one array to concatenate
#10
simjbaum
closed
5 years ago
1
for deep depth Hi-C data. Expect running time is ?
#9
lixiaoms
closed
5 years ago
3
oi的格式处理需要改进
#8
lixiaoms
closed
5 years ago
1
missing output with only jd2 files
#7
kkkaiqiang
closed
5 years ago
3
How to prepare the bedpe format file?
#6
tiramisutes
closed
5 years ago
2
cLoops: error: unrecognized arguments: 1 1 1
#5
shenscore
closed
6 years ago
3
callstripes has problems
#4
MackZhang
closed
5 years ago
4
something wrong with callStripes command!
#3
MackZhang
closed
6 years ago
3
Strand information
#2
ozturan
closed
6 years ago
1
Create LICENSE
#1
YaqiangCao
closed
6 years ago
0