mzRAPP crashes

[vgikas]

Hi Yassin I have been very excited when I found out about mzRAPP and is seems like a very nice idea But, the following issue occurs when I try to replicate the example of the vignette After creating or loading the benchmark file (and the assigned and unassigned csv as well), it seems that the Benchmark compare step finishes succesfully, but then either the Shiny or the browser crash. The error message is found below Loading required package: shiny

Listening on http://127.0.0.1:6386 Starting xcms aligned import Successful xcms aligned import. No. of peaks imported: 171573 Starting xcms unaligned import Successful xcms unaligned import. No. of peaks imported: 361693 Ignored 482 duplicated non-aligned peaks from non-targeted output (identical rt, mz and area) Starting to compare benchmark with non-targeted output Done! Warning: Error in colnamesInt: argument specifying columns received non-existing column(s): cols[1]='1' 3: runApp 2: print.shiny.appobj 1: < Could you please suggest some solution? Thank you in advance (I am using R 4.3.2 and Rstudio 2023.12.1+402 "Ocean Storm" Release) using Windows 11

[YasinEl]

Hey should be fixed so hope it will do what you need now. Let me know if you have further problems. Yasin

[vgikas]

Thank you really very much. It works perfectly. Best

[vgikas]

Dear Yasin

its works like a charm. I really really thank you very much for your effort and the fast response.

Best reagrards

E. Gikas

Hey should be fixed so hope it will do what you need now. Let me know if you have further problems. Yasin

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-- E Gikas

Professor Laboratory of Analytical Chemistry Faculty of Chemistry National and Kapodistrian University of Athens

[YasinEl]

Thank you for appreciating!