YellProgram / Yell

Yell is a program for diffuse scattering interpretation using the 3D-∆PDF refinement.
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Tricarboxamide tutorial example fails on Windows #38

Closed aglie closed 8 years ago

aglie commented 8 years ago

Says the matrix is not symmetric.

aglie commented 8 years ago

Managed to reproduce on my machine. Following is the input

''' Cell 14.12 14.12 6.93 90 90 120 LaueSymmetry 6/m DiffuseScatteringGrid -12 -12 -6 1/30 1/30 1 720 720 12

CalculationMethod approximate Refine true MaxNumberOfIterations 2 FFTGridSize 128 128 12

Scale 0.024746 RefinableVariables [corr1 = -0.06151 corr2 = 0.03 ]

MolecularScatterers [ V1ms = [ V1=[ tricarboxamide=[ wing = [ O 1 0.2709 1.0483-1 0.0111 0.048 0.088 0.090 0.044 0.020 0.032 N 1 0.1989 0.9039-1 0.218 0.061 0.056 0.092 0.030 0.031 0.038 C1 1 -0.0107 0.8970-1 0.1319 0.061 0.051 0.041 0.004 0.010 0.030 C2 1 0.0924 0.9891-1 0.1328 0.055 0.057 0.040 0.006 0.000 0.034 C4 1 0.2907 0.8798-1 0.209 0.055 0.068 0.100 0.021 0.018 0.039 C3 1 0.1950 0.9823-1 0.1140 0.046 0.056 0.054 0.000 -0.001 0.022 C5 1 0.3938 0.9777-1 0.286 0.080 0.100 0.14 0.019 -0.008 0.049 C6 1 0.2566 0.7824-1 0.3388 0.111 0.111 0.200 0.094 0.075 0.090 C7 1 0.3081 0.8563-1 0.0040 0.109 0.154 0.123 -0.005 0.038 0.093

H0A 1 0.1453 0.8653-1 0.2951 0.079 H1A 1 -0.019 0.8252-1 0.121 0.060 H5A 1 0.3818 0.9920-1 0.4165 0.156 H5B 1 0.4120 1.0407-1 0.2074 0.156 H5C 1 0.4530 0.9625-1 0.2828 0.156 H6A 1 0.2480 0.8012-1 0.4682 0.188 H6B 1 0.3117 0.7614-1 0.3366 0.188 H6C 1 0.1883 0.7225-1 0.2943 0.188 H7A 1 0.2428 0.7934-1 -0.0426 0.175 H7B 1 0.3679 0.8421-1 -0.0005 0.175 H7C 1 0.3247 0.9184-1 -0.0756 0.175 ] wing_Symmetry(-y, x-y, z) wing_Symmetry(-x+y, -x, z)]

 tricarboxamide*Symmetry(-x, -y, z+1/2)

]]

V2ms = [V1*Symmetry(x, y, 1/2-z)] ]

UnitCell [ Var = Variant[ (p=1/2) V1ms 1 0 0 0 0

(p=1/2)
V2ms  1  0 0 0 0    

] ]

Modes[ ]

Correlations [ [(0,0,0) Multiplicity 1 SubstitutionalCorrelation(Var,Var,1/2) ] [(1,0,0) Multiplicity 6 SubstitutionalCorrelation(Var,Var,0.25+corr1) ] [(2,0,0) Multiplicity 12 SubstitutionalCorrelation(Var,Var,0.25+corr2) ]

]

'''