Open yanssbu opened 9 years ago
are you accessing it by path on local or url?
path on local.
On Dec 6, 2014, at 5:54 PM, Michael Lovci notifications@github.com wrote:
are you accessing it by path on local or url?
— Reply to this email directly or view it on GitHub.
hm, seems broken for me too.
On Sat, Dec 6, 2014 at 5:55 PM, yanssbu notifications@github.com wrote:
path on local.
On Dec 6, 2014, at 5:54 PM, Michael Lovci notifications@github.com wrote:
are you accessing it by path on local or url?
— Reply to this email directly or view it on GitHub.
— Reply to this email directly or view it on GitHub https://github.com/YeoLab/flotilla/issues/215#issuecomment-65923122.
This won't fix the problem, but you can add custom lists to the data itself with:
study.expression.feature_data['new_list_name'] = study.expression.feature_data.index.isin(your_list_of_genes)
I'll get to this after the weekend.
On Sat Dec 06 2014 at 5:57:37 PM Michael Lovci notifications@github.com wrote:
hm, seems broken for me too.
On Sat, Dec 6, 2014 at 5:55 PM, yanssbu notifications@github.com wrote:
path on local.
On Dec 6, 2014, at 5:54 PM, Michael Lovci notifications@github.com wrote:
are you accessing it by path on local or url?
— Reply to this email directly or view it on GitHub.
— Reply to this email directly or view it on GitHub https://github.com/YeoLab/flotilla/issues/215#issuecomment-65923122.
— Reply to this email directly or view it on GitHub https://github.com/YeoLab/flotilla/issues/215#issuecomment-65923162.
OK, thanks. On Dec 6, 2014 7:08 PM, "Olga Botvinnik" notifications@github.com wrote:
This won't fix the problem, but you can add custom lists to the data itself with:
study.expression.feature_data['new_list_name'] = study.expression.feature_data.index.isin(your_list_of_genes)
I'll get to this after the weekend.
On Sat Dec 06 2014 at 5:57:37 PM Michael Lovci notifications@github.com wrote:
hm, seems broken for me too.
On Sat, Dec 6, 2014 at 5:55 PM, yanssbu notifications@github.com wrote:
path on local.
On Dec 6, 2014, at 5:54 PM, Michael Lovci notifications@github.com wrote:
are you accessing it by path on local or url?
— Reply to this email directly or view it on GitHub.
— Reply to this email directly or view it on GitHub https://github.com/YeoLab/flotilla/issues/215#issuecomment-65923122.
— Reply to this email directly or view it on GitHub https://github.com/YeoLab/flotilla/issues/215#issuecomment-65923162.
— Reply to this email directly or view it on GitHub https://github.com/YeoLab/flotilla/issues/215#issuecomment-65924589.
The same custom list works for interactive_pca but not for interactive_clustermap.
Raise the following error: ValueError: This data subset is empty. Please double-check that the gene ids are for the correct species!