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YeoLab / gscripts

General Use Scripts and Helper functions
MIT License
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Why no repetitive region removal on paired end reads? #57

Closed olgabot closed 9 years ago

olgabot commented 9 years ago

see here: https://github.com/YeoLab/gscripts/blob/master/qscripts/analyze_rna_seq.scala#L262

gpratt commented 9 years ago

Trimming doesn't happen either.

I'll deal with this when I start dealing with paired-end data more frequently.

Gabriel Pratt Bioinformatics Graduate Student, Yeo Lab University of California San Diego

On Fri, Jan 30, 2015 at 4:45 PM, Olga Botvinnik notifications@github.com wrote:

see here: https://github.com/YeoLab/gscripts/blob/master/qscripts/analyze_rna_seq.scala#L262

— Reply to this email directly or view it on GitHub https://github.com/YeoLab/gscripts/issues/57.

gpratt commented 9 years ago

Fixed a while ago