Hello!
When I used the overlap_peakfi_with_bam_PE.pl
perl overlap_peakfi_with_bam_PE.pl \
EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.bam \
INPUT_PE.rep2_clip.NIL.r1.fq.genome-mappedSo.rmDupSo.merged.r2.bam \
EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.peakClusters.bed \
ip_mapped_readnum.txt \
input_mapped_readnum.txt \
EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.peakClusters.normed.bed
the error was:
reading peak file EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.peakClusters.bed
now doing expt EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.bam
now doing input INPUT_PE.rep2_clip.NIL.r1.fq.genome-mappedSo.rmDupSo.merged.r2.bam
Use of uninitialized value in division (/) at overlap_peakfi_with_bam_PE.pl line 67.
Illegal division by zero at overlap_peakfi_with_bam_PE.pl line 67.
I don't konw how to solve this problem.Could you help me?
Hello! When I used the overlap_peakfi_with_bam_PE.pl perl overlap_peakfi_with_bam_PE.pl \ EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.bam \ INPUT_PE.rep2_clip.NIL.r1.fq.genome-mappedSo.rmDupSo.merged.r2.bam \ EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.peakClusters.bed \ ip_mapped_readnum.txt \ input_mapped_readnum.txt \ EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.peakClusters.normed.bed
the error was: reading peak file EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.peakClusters.bed now doing expt EXAMPLE_PE.rep2_clip.A03.r1.fq.genome-mappedSo.rmDupSo.merged.r2.bam now doing input INPUT_PE.rep2_clip.NIL.r1.fq.genome-mappedSo.rmDupSo.merged.r2.bam Use of uninitialized value in division (/) at overlap_peakfi_with_bam_PE.pl line 67. Illegal division by zero at overlap_peakfi_with_bam_PE.pl line 67.
I don't konw how to solve this problem.Could you help me?