Deal with insufficient read depth cases well

YeoLab / outrigger

Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data

http://yeolab.github.io/outrigger/

BSD 3-Clause "New" or "Revised" License

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Deal with insufficient read depth cases well #58

Closed olgabot closed 7 years ago

olgabot commented 7 years ago

For all the SE cases below, Case 5 and Cases 6a-b are not addressed correctly. The junction with insufficient junctions is treated as 0 and this may be skewing the results.