Parallelize exon-junction adjacency finding

YeoLab / outrigger

Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data

http://yeolab.github.io/outrigger/

BSD 3-Clause "New" or "Revised" License

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Parallelize exon-junction adjacency finding #6

Open olgabot opened 8 years ago

olgabot commented 8 years ago

This is the most time consuming step and could be easily parallelized and merged. The superfluous thing would be to have multiple gffutils database copies and multiple exon-junction adjacency dataframes, and how to merge them in the end.