Build ERROR

[Yikun]

xxx=`grep -l "Status: ERROR" /home/biocbuild/public_html/BBS/3.17/bioc/products-in/kunpeng1/buildsrc/* | xargs -L 1 basename | cut -d '-' -f1 | sed "s/.........$//g"`
for i in $xxx
do
    echo $i""  > /tmp/report.txt
    echo "" >> /tmp/report.txt
    echo '```' >> /tmp/report.txt
    cat /home/biocbuild/public_html/BBS/3.17/bioc/products-in/kunpeng1/buildsrc/$i".buildsrc-out.txt" >> /tmp/report.txt
    echo '```' >> /tmp/report.txt
    # hub issue create -F

    if grep -q "not available for package" /tmp/report.txt
    then
        echo 'Skip '$i, due to not available for package `grep "not available for package" /tmp/report.txt`
    else
        echo 'Issue '$i: https://yikun.github.io/bioconductor-0208/report/$i/kunpeng1-buildsrc.html
    fi
done

Skip AneuFinder, due to not available for package ERROR: dependency ‘ReorderCluster’ is not available for package ‘AneuFinder’ Issue APL: https://yikun.github.io/bioconductor-0208/report/APL/kunpeng1-buildsrc.html Issue ArrayExpress: https://yikun.github.io/bioconductor-0208/report/ArrayExpress/kunpeng1-buildsrc.html Issue ArrayExpressHTS: https://yikun.github.io/bioconductor-0208/report/ArrayExpressHTS/kunpeng1-buildsrc.html Skip ASpediaFI, due to not available for package ERROR: dependency ‘mGSZ’ is not available for package ‘ASpediaFI’ Issue attract: https://yikun.github.io/bioconductor-0208/report/attract/kunpeng1-buildsrc.html Issue AUCell: https://yikun.github.io/bioconductor-0208/report/AUCell/kunpeng1-buildsrc.html Issue autonomics: https://yikun.github.io/bioconductor-0208/report/autonomics/kunpeng1-buildsrc.html Issue bambu: https://yikun.github.io/bioconductor-0208/report/bambu/kunpeng1-buildsrc.html Issue basilisk: https://yikun.github.io/bioconductor-0208/report/basilisk/kunpeng1-buildsrc.html Issue batchelor: https://yikun.github.io/bioconductor-0208/report/batchelor/kunpeng1-buildsrc.html Issue baySeq: https://yikun.github.io/bioconductor-0208/report/baySeq/kunpeng1-buildsrc.html Issue BgeeDB: https://yikun.github.io/bioconductor-0208/report/BgeeDB/kunpeng1-buildsrc.html Issue bgx: https://yikun.github.io/bioconductor-0208/report/bgx/kunpeng1-buildsrc.html Skip bioassayR, due to not available for package ERROR: dependency ‘ChemmineR’ is not available for package ‘bioassayR’ Issue biobtreeR: https://yikun.github.io/bioconductor-0208/report/biobtreeR/kunpeng1-buildsrc.html Issue BiocOncoTK: https://yikun.github.io/bioconductor-0208/report/BiocOncoTK/kunpeng1-buildsrc.html Issue biomvRCNS: https://yikun.github.io/bioconductor-0208/report/biomvRCNS/kunpeng1-buildsrc.html Issue BiSeq: https://yikun.github.io/bioconductor-0208/report/BiSeq/kunpeng1-buildsrc.html Issue blima: https://yikun.github.io/bioconductor-0208/report/blima/kunpeng1-buildsrc.html Issue BSgenome: https://yikun.github.io/bioconductor-0208/report/BSgenome/kunpeng1-buildsrc.html Issue CancerInSilico: https://yikun.github.io/bioconductor-0208/report/CancerInSilico/kunpeng1-buildsrc.html Issue CATALYST: https://yikun.github.io/bioconductor-0208/report/CATALYST/kunpeng1-buildsrc.html Skip celda, due to not available for package ERROR: dependency ‘multipanelfigure’ is not available for package ‘celda’ Issue CelliD: https://yikun.github.io/bioconductor-0208/report/CelliD/kunpeng1-buildsrc.html Skip ChemmineR, due to not available for package ERROR: dependency ‘rsvg’ is not available for package ‘ChemmineR’ Skip ChIC, due to not available for package ERROR: dependency ‘spp’ is not available for package ‘ChIC’ Skip chimeraviz, due to not available for package ERROR: dependency ‘magick’ is not available for package ‘chimeraviz’ Issue ChIPpeakAnno: https://yikun.github.io/bioconductor-0208/report/ChIPpeakAnno/kunpeng1-buildsrc.html Issue ChIPseeker: https://yikun.github.io/bioconductor-0208/report/ChIPseeker/kunpeng1-buildsrc.html Issue CHRONOS: https://yikun.github.io/bioconductor-0208/report/CHRONOS/kunpeng1-buildsrc.html Issue cicero: https://yikun.github.io/bioconductor-0208/report/cicero/kunpeng1-buildsrc.html Issue CINdex: https://yikun.github.io/bioconductor-0208/report/CINdex/kunpeng1-buildsrc.html Skip CircSeqAlignTk, due to not available for package ERROR: dependencies ‘Rbowtie2’, ‘Rhisat2’ are not available for package ‘CircSeqAlignTk’ Issue CiteFuse: https://yikun.github.io/bioconductor-0208/report/CiteFuse/kunpeng1-buildsrc.html Skip CompoundDb, due to not available for package ERROR: dependency ‘ChemmineR’ is not available for package ‘CompoundDb’ Skip CONFESS, due to not available for package ERROR: dependencies ‘flowClust’, ‘flowMerge’ are not available for package ‘CONFESS’ Issue consICA: https://yikun.github.io/bioconductor-0208/report/consICA/kunpeng1-buildsrc.html Issue CONSTANd: https://yikun.github.io/bioconductor-0208/report/CONSTANd/kunpeng1-buildsrc.html Issue copynumber: https://yikun.github.io/bioconductor-0208/report/copynumber/kunpeng1-buildsrc.html Issue CopywriteR: https://yikun.github.io/bioconductor-0208/report/CopywriteR/kunpeng1-buildsrc.html Issue corral: https://yikun.github.io/bioconductor-0208/report/corral/kunpeng1-buildsrc.html Skip crisprBwa, due to not available for package ERROR: dependency ‘Rbwa’ is not available for package ‘crisprBwa’ Issue cTRAP: https://yikun.github.io/bioconductor-0208/report/cTRAP/kunpeng1-buildsrc.html Skip CTSV, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘CTSV’ Skip customCMPdb, due to not available for package ERROR: dependency ‘ChemmineR’ is not available for package ‘customCMPdb’ Skip cyanoFilter, due to not available for package ERROR: dependency ‘flowClust’ is not available for package ‘cyanoFilter’ Skip cytomapper, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘cytomapper’ Skip CytoML, due to not available for package ERROR: dependency ‘openCyto’ is not available for package ‘CytoML’ Issue dasper: https://yikun.github.io/bioconductor-0208/report/dasper/kunpeng1-buildsrc.html Issue debCAM: https://yikun.github.io/bioconductor-0208/report/debCAM/kunpeng1-buildsrc.html Issue deco: https://yikun.github.io/bioconductor-0208/report/deco/kunpeng1-buildsrc.html Issue densvis: https://yikun.github.io/bioconductor-0208/report/densvis/kunpeng1-buildsrc.html Issue destiny: https://yikun.github.io/bioconductor-0208/report/destiny/kunpeng1-buildsrc.html Issue DEWSeq: https://yikun.github.io/bioconductor-0208/report/DEWSeq/kunpeng1-buildsrc.html Skip DiscoRhythm, due to not available for package ERROR: dependency ‘magick’ is not available for package ‘DiscoRhythm’ Issue DMRcate: https://yikun.github.io/bioconductor-0208/report/DMRcate/kunpeng1-buildsrc.html Issue eegc: https://yikun.github.io/bioconductor-0208/report/eegc/kunpeng1-buildsrc.html Skip eiR, due to not available for package ERROR: dependency ‘ChemmineR’ is not available for package ‘eiR’ Issue eisaR: https://yikun.github.io/bioconductor-0208/report/eisaR/kunpeng1-buildsrc.html Issue enhancerHomologSearch: https://yikun.github.io/bioconductor-0208/report/enhancerHomologSearch/kunpeng1-buildsrc.html Issue ensemblVEP: https://yikun.github.io/bioconductor-0208/report/ensemblVEP/kunpeng1-buildsrc.html Issue epigraHMM: https://yikun.github.io/bioconductor-0208/report/epigraHMM/kunpeng1-buildsrc.html Skip epihet, due to not available for package ERROR: dependency ‘EntropyExplorer’ is not available for package ‘epihet’ Issue EpiMix: https://yikun.github.io/bioconductor-0208/report/EpiMix/kunpeng1-buildsrc.html Issue epimutacions: https://yikun.github.io/bioconductor-0208/report/epimutacions/kunpeng1-buildsrc.html Skip esATAC, due to not available for package ERROR: dependency ‘Rbowtie2’ is not available for package ‘esATAC’ Issue EventPointer: https://yikun.github.io/bioconductor-0208/report/EventPointer/kunpeng1-buildsrc.html Skip ExperimentSubset, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘ExperimentSubset’ Issue FELLA: https://yikun.github.io/bioconductor-0208/report/FELLA/kunpeng1-buildsrc.html Issue fgsea: https://yikun.github.io/bioconductor-0208/report/fgsea/kunpeng1-buildsrc.html Issue FLAMES: https://yikun.github.io/bioconductor-0208/report/FLAMES/kunpeng1-buildsrc.html Issue flowClust: https://yikun.github.io/bioconductor-0208/report/flowClust/kunpeng1-buildsrc.html Issue flowCore: https://yikun.github.io/bioconductor-0208/report/flowCore/kunpeng1-buildsrc.html Skip flowMerge, due to not available for package ERROR: dependency ‘flowClust’ is not available for package ‘flowMerge’ Issue flowPloidy: https://yikun.github.io/bioconductor-0208/report/flowPloidy/kunpeng1-buildsrc.html Issue FlowSOM: https://yikun.github.io/bioconductor-0208/report/FlowSOM/kunpeng1-buildsrc.html Issue flowTime: https://yikun.github.io/bioconductor-0208/report/flowTime/kunpeng1-buildsrc.html Skip flowTrans, due to not available for package ERROR: dependency ‘flowClust’ is not available for package ‘flowTrans’ Skip fmcsR, due to not available for package ERROR: dependency ‘ChemmineR’ is not available for package ‘fmcsR’ Issue GAPGOM: https://yikun.github.io/bioconductor-0208/report/GAPGOM/kunpeng1-buildsrc.html Skip gcatest, due to not available for package ERROR: dependency ‘lfa’ is not available for package ‘gcatest’ Issue GCSscore: https://yikun.github.io/bioconductor-0208/report/GCSscore/kunpeng1-buildsrc.html Issue genbankr: https://yikun.github.io/bioconductor-0208/report/genbankr/kunpeng1-buildsrc.html Issue GeneAccord: https://yikun.github.io/bioconductor-0208/report/GeneAccord/kunpeng1-buildsrc.html Issue GeneGA: https://yikun.github.io/bioconductor-0208/report/GeneGA/kunpeng1-buildsrc.html Issue GenomicScores: https://yikun.github.io/bioconductor-0208/report/GenomicScores/kunpeng1-buildsrc.html Issue GeomxTools: https://yikun.github.io/bioconductor-0208/report/GeomxTools/kunpeng1-buildsrc.html Issue GEOquery: https://yikun.github.io/bioconductor-0208/report/GEOquery/kunpeng1-buildsrc.html Issue ggcyto: https://yikun.github.io/bioconductor-0208/report/ggcyto/kunpeng1-buildsrc.html Skip ggspavis, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘ggspavis’ Issue GIGSEA: https://yikun.github.io/bioconductor-0208/report/GIGSEA/kunpeng1-buildsrc.html Issue gmapR: https://yikun.github.io/bioconductor-0208/report/gmapR/kunpeng1-buildsrc.html Issue GmicR: https://yikun.github.io/bioconductor-0208/report/GmicR/kunpeng1-buildsrc.html Issue GRaNIE: https://yikun.github.io/bioconductor-0208/report/GRaNIE/kunpeng1-buildsrc.html Issue HPAStainR: https://yikun.github.io/bioconductor-0208/report/HPAStainR/kunpeng1-buildsrc.html Skip HTSeqGenie, due to not available for package ERROR: dependency ‘gmapR’ is not available for package ‘HTSeqGenie’ Issue HumanTranscriptomeCompendium: https://yikun.github.io/bioconductor-0208/report/HumanTranscriptomeCompendium/kunpeng1-buildsrc.html Issue iClusterPlus: https://yikun.github.io/bioconductor-0208/report/iClusterPlus/kunpeng1-buildsrc.html Skip ideal, due to not available for package ERROR: dependency ‘IHW’ is not available for package ‘ideal’ Issue idpr: https://yikun.github.io/bioconductor-0208/report/idpr/kunpeng1-buildsrc.html Skip IHW, due to not available for package ERROR: dependency ‘lpsymphony’ is not available for package ‘IHW’ Issue imageHTS: https://yikun.github.io/bioconductor-0208/report/imageHTS/kunpeng1-buildsrc.html Skip imcRtools, due to not available for package ERROR: dependencies ‘SpatialExperiment’, ‘cytomapper’ are not available for package ‘imcRtools’ Issue ImmuneSpaceR: https://yikun.github.io/bioconductor-0208/report/ImmuneSpaceR/kunpeng1-buildsrc.html Issue ISAnalytics: https://yikun.github.io/bioconductor-0208/report/ISAnalytics/kunpeng1-buildsrc.html Issue IsoformSwitchAnalyzeR: https://yikun.github.io/bioconductor-0208/report/IsoformSwitchAnalyzeR/kunpeng1-buildsrc.html Issue LEA: https://yikun.github.io/bioconductor-0208/report/LEA/kunpeng1-buildsrc.html Issue lfa: https://yikun.github.io/bioconductor-0208/report/lfa/kunpeng1-buildsrc.html Skip lisaClust, due to not available for package ERROR: dependencies ‘spicyR’, ‘SpatialExperiment’ are not available for package ‘lisaClust’ Issue LowMACA: https://yikun.github.io/bioconductor-0208/report/LowMACA/kunpeng1-buildsrc.html Issue lpsymphony: https://yikun.github.io/bioconductor-0208/report/lpsymphony/kunpeng1-buildsrc.html Skip LymphoSeq, due to not available for package ERROR: dependency ‘msa’ is not available for package ‘LymphoSeq’ Issue maanova: https://yikun.github.io/bioconductor-0208/report/maanova/kunpeng1-buildsrc.html Skip Maaslin2, due to not available for package ERROR: dependency ‘lpsymphony’ is not available for package ‘Maaslin2’ Skip Macarron, due to not available for package ERROR: dependency ‘Maaslin2’ is not available for package ‘Macarron’ Issue mAPKL: https://yikun.github.io/bioconductor-0208/report/mAPKL/kunpeng1-buildsrc.html Issue megadepth: https://yikun.github.io/bioconductor-0208/report/megadepth/kunpeng1-buildsrc.html Skip MetaboAnnotation, due to not available for package ERROR: dependency ‘CompoundDb’ is not available for package ‘MetaboAnnotation’ Issue MetaPhOR: https://yikun.github.io/bioconductor-0208/report/MetaPhOR/kunpeng1-buildsrc.html Issue metaseqR2: https://yikun.github.io/bioconductor-0208/report/metaseqR2/kunpeng1-buildsrc.html Issue metavizr: https://yikun.github.io/bioconductor-0208/report/metavizr/kunpeng1-buildsrc.html Issue methrix: https://yikun.github.io/bioconductor-0208/report/methrix/kunpeng1-buildsrc.html Issue methylCC: https://yikun.github.io/bioconductor-0208/report/methylCC/kunpeng1-buildsrc.html Issue methylclock: https://yikun.github.io/bioconductor-0208/report/methylclock/kunpeng1-buildsrc.html Skip MetID, due to not available for package ERROR: dependency ‘ChemmineR’ is not available for package ‘MetID’ Issue MGFR: https://yikun.github.io/bioconductor-0208/report/MGFR/kunpeng1-buildsrc.html Issue MIGSA: https://yikun.github.io/bioconductor-0208/report/MIGSA/kunpeng1-buildsrc.html Issue miloR: https://yikun.github.io/bioconductor-0208/report/miloR/kunpeng1-buildsrc.html Issue MIMOSA: https://yikun.github.io/bioconductor-0208/report/MIMOSA/kunpeng1-buildsrc.html Skip MMAPPR2, due to not available for package ERROR: dependency ‘gmapR’ is not available for package ‘MMAPPR2’ Skip MMUPHin, due to not available for package ERROR: dependency ‘Maaslin2’ is not available for package ‘MMUPHin’ Issue motifbreakR: https://yikun.github.io/bioconductor-0208/report/motifbreakR/kunpeng1-buildsrc.html Issue msa: https://yikun.github.io/bioconductor-0208/report/msa/kunpeng1-buildsrc.html Issue MsBackendRawFileReader: https://yikun.github.io/bioconductor-0208/report/MsBackendRawFileReader/kunpeng1-buildsrc.html Issue MuData: https://yikun.github.io/bioconductor-0208/report/MuData/kunpeng1-buildsrc.html Issue muscat: https://yikun.github.io/bioconductor-0208/report/muscat/kunpeng1-buildsrc.html Issue NanoMethViz: https://yikun.github.io/bioconductor-0208/report/NanoMethViz/kunpeng1-buildsrc.html Skip NBSplice, due to not available for package ERROR: dependency ‘mppa’ is not available for package ‘NBSplice’ Issue netDx: https://yikun.github.io/bioconductor-0208/report/netDx/kunpeng1-buildsrc.html Issue netOmics: https://yikun.github.io/bioconductor-0208/report/netOmics/kunpeng1-buildsrc.html Issue NetPathMiner: https://yikun.github.io/bioconductor-0208/report/NetPathMiner/kunpeng1-buildsrc.html Skip nnSVG, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘nnSVG’ Issue NPARC: https://yikun.github.io/bioconductor-0208/report/NPARC/kunpeng1-buildsrc.html Issue nullranges: https://yikun.github.io/bioconductor-0208/report/nullranges/kunpeng1-buildsrc.html Issue ODER: https://yikun.github.io/bioconductor-0208/report/ODER/kunpeng1-buildsrc.html Skip odseq, due to not available for package ERROR: dependency ‘msa’ is not available for package ‘odseq’ Issue omicRexposome: https://yikun.github.io/bioconductor-0208/report/omicRexposome/kunpeng1-buildsrc.html Skip OMICsPCA, due to not available for package ERROR: dependency ‘magick’ is not available for package ‘OMICsPCA’ Issue omicsPrint: https://yikun.github.io/bioconductor-0208/report/omicsPrint/kunpeng1-buildsrc.html Issue Omixer: https://yikun.github.io/bioconductor-0208/report/Omixer/kunpeng1-buildsrc.html Skip openCyto, due to not available for package ERROR: dependency ‘flowClust’ is not available for package ‘openCyto’ Skip OpenStats, due to not available for package ERROR: dependency ‘summarytools’ is not available for package ‘OpenStats’ Issue optimalFlow: https://yikun.github.io/bioconductor-0208/report/optimalFlow/kunpeng1-buildsrc.html Issue pareg: https://yikun.github.io/bioconductor-0208/report/pareg/kunpeng1-buildsrc.html Issue PCAtools: https://yikun.github.io/bioconductor-0208/report/PCAtools/kunpeng1-buildsrc.html Issue phemd: https://yikun.github.io/bioconductor-0208/report/phemd/kunpeng1-buildsrc.html Issue pkgDepTools: https://yikun.github.io/bioconductor-0208/report/pkgDepTools/kunpeng1-buildsrc.html Issue plotgardener: https://yikun.github.io/bioconductor-0208/report/plotgardener/kunpeng1-buildsrc.html Issue podkat: https://yikun.github.io/bioconductor-0208/report/podkat/kunpeng1-buildsrc.html Issue PrecisionTrialDrawer: https://yikun.github.io/bioconductor-0208/report/PrecisionTrialDrawer/kunpeng1-buildsrc.html Issue proFIA: https://yikun.github.io/bioconductor-0208/report/proFIA/kunpeng1-buildsrc.html Issue profileScoreDist: https://yikun.github.io/bioconductor-0208/report/profileScoreDist/kunpeng1-buildsrc.html Issue projectR: https://yikun.github.io/bioconductor-0208/report/projectR/kunpeng1-buildsrc.html Issue protGear: https://yikun.github.io/bioconductor-0208/report/protGear/kunpeng1-buildsrc.html Skip pulsedSilac, due to not available for package ERROR: dependency ‘taRifx’ is not available for package ‘pulsedSilac’ Issue qrqc: https://yikun.github.io/bioconductor-0208/report/qrqc/kunpeng1-buildsrc.html Issue quantiseqr: https://yikun.github.io/bioconductor-0208/report/quantiseqr/kunpeng1-buildsrc.html Issue QuasR: https://yikun.github.io/bioconductor-0208/report/QuasR/kunpeng1-buildsrc.html Issue randRotation: https://yikun.github.io/bioconductor-0208/report/randRotation/kunpeng1-buildsrc.html Issue rawrr: https://yikun.github.io/bioconductor-0208/report/rawrr/kunpeng1-buildsrc.html Issue Rbec: https://yikun.github.io/bioconductor-0208/report/Rbec/kunpeng1-buildsrc.html Issue Rbowtie2: https://yikun.github.io/bioconductor-0208/report/Rbowtie2/kunpeng1-buildsrc.html Issue Rbwa: https://yikun.github.io/bioconductor-0208/report/Rbwa/kunpeng1-buildsrc.html Issue RcisTarget: https://yikun.github.io/bioconductor-0208/report/RcisTarget/kunpeng1-buildsrc.html Issue Rcwl: https://yikun.github.io/bioconductor-0208/report/Rcwl/kunpeng1-buildsrc.html Skip ReactomeContentService4R, due to not available for package ERROR: dependency ‘magick’ is not available for package ‘ReactomeContentService4R’ Skip ReactomeGraph4R, due to not available for package ERROR: dependency ‘ReactomeContentService4R’ is not available for package ‘ReactomeGraph4R’ Issue recount: https://yikun.github.io/bioconductor-0208/report/recount/kunpeng1-buildsrc.html Issue RegEnrich: https://yikun.github.io/bioconductor-0208/report/RegEnrich/kunpeng1-buildsrc.html Skip rfaRm, due to not available for package ERROR: dependencies ‘rsvg’, ‘magick’ are not available for package ‘rfaRm’ Issue RGMQL: https://yikun.github.io/bioconductor-0208/report/RGMQL/kunpeng1-buildsrc.html Issue RGSEA: https://yikun.github.io/bioconductor-0208/report/RGSEA/kunpeng1-buildsrc.html Issue Rhisat2: https://yikun.github.io/bioconductor-0208/report/Rhisat2/kunpeng1-buildsrc.html Issue rifi: https://yikun.github.io/bioconductor-0208/report/rifi/kunpeng1-buildsrc.html Issue RIPAT: https://yikun.github.io/bioconductor-0208/report/RIPAT/kunpeng1-buildsrc.html Issue RLSeq: https://yikun.github.io/bioconductor-0208/report/RLSeq/kunpeng1-buildsrc.html Skip RMassBank, due to not available for package ERROR: dependency ‘ChemmineR’ is not available for package ‘RMassBank’ Issue rmspc: https://yikun.github.io/bioconductor-0208/report/rmspc/kunpeng1-buildsrc.html Issue Rnits: https://yikun.github.io/bioconductor-0208/report/Rnits/kunpeng1-buildsrc.html Issue SAIGEgds: https://yikun.github.io/bioconductor-0208/report/SAIGEgds/kunpeng1-buildsrc.html Issue savR: https://yikun.github.io/bioconductor-0208/report/savR/kunpeng1-buildsrc.html Skip SBGNview, due to not available for package ERROR: dependency ‘rsvg’ is not available for package ‘SBGNview’ Issue scAnnotatR: https://yikun.github.io/bioconductor-0208/report/scAnnotatR/kunpeng1-buildsrc.html Issue SCATE: https://yikun.github.io/bioconductor-0208/report/SCATE/kunpeng1-buildsrc.html Issue scBubbletree: https://yikun.github.io/bioconductor-0208/report/scBubbletree/kunpeng1-buildsrc.html Issue scPipe: https://yikun.github.io/bioconductor-0208/report/scPipe/kunpeng1-buildsrc.html Issue scry: https://yikun.github.io/bioconductor-0208/report/scry/kunpeng1-buildsrc.html Issue scTreeViz: https://yikun.github.io/bioconductor-0208/report/scTreeViz/kunpeng1-buildsrc.html Issue scuttle: https://yikun.github.io/bioconductor-0208/report/scuttle/kunpeng1-buildsrc.html Issue seqArchRplus: https://yikun.github.io/bioconductor-0208/report/seqArchRplus/kunpeng1-buildsrc.html Issue sigPathway: https://yikun.github.io/bioconductor-0208/report/sigPathway/kunpeng1-buildsrc.html Skip simpleSeg, due to not available for package ERROR: dependency ‘cytomapper’ is not available for package ‘simpleSeg’ Skip singleCellTK, due to not available for package ERROR: dependency ‘celda’ is not available for package ‘singleCellTK’ Issue SingleMoleculeFootprinting: https://yikun.github.io/bioconductor-0208/report/SingleMoleculeFootprinting/kunpeng1-buildsrc.html Issue slingshot: https://yikun.github.io/bioconductor-0208/report/slingshot/kunpeng1-buildsrc.html Issue snapcount: https://yikun.github.io/bioconductor-0208/report/snapcount/kunpeng1-buildsrc.html Issue sparseDOSSA: https://yikun.github.io/bioconductor-0208/report/sparseDOSSA/kunpeng1-buildsrc.html Skip spaSim, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘spaSim’ Skip spatialDE, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘spatialDE’ Skip SpatialExperiment, due to not available for package ERROR: dependency ‘magick’ is not available for package ‘SpatialExperiment’ Skip SpatialFeatureExperiment, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘SpatialFeatureExperiment’ Skip spatialHeatmap, due to not available for package ERROR: dependency ‘rsvg’ is not available for package ‘spatialHeatmap’ Skip SPIAT, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘SPIAT’ Skip spicyR, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘spicyR’ Skip SpotClean, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘SpotClean’ Issue SPOTlight: https://yikun.github.io/bioconductor-0208/report/SPOTlight/kunpeng1-buildsrc.html Issue STAN: https://yikun.github.io/bioconductor-0208/report/STAN/kunpeng1-buildsrc.html Skip standR, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘standR’ Skip Statial, due to not available for package ERROR: dependency ‘spatstat.core’ is not available for package ‘Statial’ Skip stJoincount, due to not available for package ERROR: dependency ‘SpatialExperiment’ is not available for package ‘stJoincount’ Issue STRINGdb: https://yikun.github.io/bioconductor-0208/report/STRINGdb/kunpeng1-buildsrc.html Skip surfaltr, due to not available for package ERROR: dependency ‘msa’ is not available for package ‘surfaltr’ Issue swfdr: https://yikun.github.io/bioconductor-0208/report/swfdr/kunpeng1-buildsrc.html Issue TADCompare: https://yikun.github.io/bioconductor-0208/report/TADCompare/kunpeng1-buildsrc.html Issue TCGAbiolinks: https://yikun.github.io/bioconductor-0208/report/TCGAbiolinks/kunpeng1-buildsrc.html Issue TCGAutils: https://yikun.github.io/bioconductor-0208/report/TCGAutils/kunpeng1-buildsrc.html Issue TCseq: https://yikun.github.io/bioconductor-0208/report/TCseq/kunpeng1-buildsrc.html Skip TileDBArray, due to not available for package ERROR: dependency ‘tiledb’ is not available for package ‘TileDBArray’ Skip timeOmics, due to not available for package ERROR: dependency ‘propr’ is not available for package ‘timeOmics’ Skip tomoseqr, due to not available for package ERROR: dependency ‘animation’ is not available for package ‘tomoseqr’ Issue Travel: https://yikun.github.io/bioconductor-0208/report/Travel/kunpeng1-buildsrc.html Issue TREG: https://yikun.github.io/bioconductor-0208/report/TREG/kunpeng1-buildsrc.html Skip tscR, due to not available for package ERROR: dependency ‘kmlShape’ is not available for package ‘tscR’ Skip UMI4Cats, due to not available for package ERROR: dependencies ‘magick’, ‘Rbowtie2’ are not available for package ‘UMI4Cats’ Issue VariantFiltering: https://yikun.github.io/bioconductor-0208/report/VariantFiltering/kunpeng1-buildsrc.html Issue velociraptor: https://yikun.github.io/bioconductor-0208/report/velociraptor/kunpeng1-buildsrc.html Skip Voyager, due to not available for package ERROR: dependencies ‘SpatialExperiment’, ‘SpatialFeatureExperiment’ are not available for package ‘Voyager’ Issue wppi: https://yikun.github.io/bioconductor-0208/report/wppi/kunpeng1-buildsrc.html Issue zFPKM: https://yikun.github.io/bioconductor-0208/report/zFPKM/kunpeng1-buildsrc.html