cosmiq.install

[martin-g]

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL cosmiq
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
ERROR: dependency ‘faahKO’ is not available for package ‘cosmiq’
* removing ‘/home/biocbuild/bbs-3.17-bioc/R/library/cosmiq’

[martin-g]

This is strange, because faahKO was already installed:

BiocManager::install(c("faahKO"), type = "source", checkBuilt = TRUE)
Bioconductor version 3.17 (BiocManager 1.30.20), R Under development (unstable)
  (2023-01-14 r83615)
Old packages: 'flowClust'
Update all/some/none? [a/s/n]: n
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'faahKO'

I've reinstalled it anyway:

> BiocManager::install(c("faahKO"), type = "source", checkBuilt = TRUE, force = TRUE)
Bioconductor version 3.17 (BiocManager 1.30.20), R Under development (unstable)
  (2023-01-14 r83615)
Installing package(s) 'faahKO'
trying URL 'https://bioconductor.org/packages/3.17/data/experiment/src/contrib/faahKO_1.39.0.tar.gz'
Content type 'application/x-gzip' length 16808371 bytes (16.0 MB)
==================================================
downloaded 16.0 MB

* installing *source* package ‘faahKO’ ...
...

[martin-g]

https://bioconductor.org/checkResults/3.18/bioc-LATEST/cosmiq/kunpeng2-buildsrc.html is fully green!