Error in jpeg(paste("Circular-Manhattan.", paste(taxa, collapse = "."), : unable to start jpeg() device

[muhammadharoon786]

This is the command, I have used because I have more than one p values associated to traits.

CMplot(all_files,type="p",plot.type="c",chr.labels=paste("Chr",c(1:10),sep=""),r=0.4,cir.legend=TRUE, outward=FALSE,cir.legend.col="black",cir.chr.h=1.3,chr.den.col="black",file="jpg", memo="",dpi=300,file.output=TRUE,verbose=TRUE,width=10,height=10)

But, I am receiving this error (Error in jpeg(paste("Circular-Manhattan.", paste(taxa, collapse = "."), : unable to start jpeg() device).

Further when I run this command suggested by someone, I receive the output as explained below :

dev.off() Error in dev.off() : cannot shut down device 1 (the null device)

NOTE: Rectangular plots are working fine but I am only facing this issue while running the script for circular plots. Please suggsest me some solution. Thanks!

[hyacz]

Please check the output of the following command:

> capabilities()
       jpeg         png        tiff       tcltk         X11        aqua
       TRUE        TRUE        TRUE        TRUE        TRUE        TRUE
   http/ftp     sockets      libxml        fifo      cledit       iconv
       TRUE        TRUE        TRUE        TRUE        TRUE        TRUE
        NLS       Rprof     profmem       cairo         ICU long.double
       TRUE        TRUE        TRUE        TRUE        TRUE       FALSE
    libcurl
       TRUE

Is the value of jpeg TRUE?

[muhammadharoon786]

hi, thanks for commenting. The reason has been resolved. Actually, I didn't change the name of columns which was main obstacle to make this graph. Change the name of columns into trait1, trait2, trait3..... for multiple p values.

[hyacz]

OK, @YinLiLin let's consider if there could be a friendlier error message here.

Thank you for using CMplot, feel free to contact us with any questions. 😄