Closed mattjones315 closed 2 years ago
Merging #154 (da061cd) into master (d13d3e7) will increase coverage by
0.03%
. The diff coverage is89.83%
.
@@ Coverage Diff @@
## master #154 +/- ##
==========================================
+ Coverage 87.09% 87.13% +0.03%
==========================================
Files 70 71 +1
Lines 4821 4880 +59
==========================================
+ Hits 4199 4252 +53
- Misses 622 628 +6
Impacted Files | Coverage Δ | |
---|---|---|
cassiopeia/data/__init__.py | 100.00% <ø> (ø) |
|
cassiopeia/tools/topology.py | 100.00% <ø> (ø) |
|
cassiopeia/data/utilities.py | 88.31% <79.16%> (-1.69%) |
:arrow_down: |
cassiopeia/tools/coupling.py | 97.05% <97.05%> (ø) |
|
cassiopeia/tools/__init__.py | 100.00% <100.00%> (ø) |
Continue to review full report at Codecov.
Legend - Click here to learn more
Δ = absolute <relative> (impact)
,ø = not affected
,? = missing data
Powered by Codecov. Last update d13d3e7...da061cd. Read the comment docs.
Implements the Evolutionary Coupling statistic.
The main logic is stored in
cassiopeia/tools/coupling.py
which in the future can store other methods for computing the "couplings" between variables.Auxiliary functionality is implemented in
cassiopeia/data/utilities.py
for computing distances between categories.This will work towards resolving #149