Open Roger-GOAT opened 2 years ago
Thank you for the great software! When I replicated 2E, it showed an error as follows. Other pictures were good. Would the team give some tips?
--------------------------------------------------------------------------- TypeError Traceback (most recent call last) <ipython-input-57-f357a74f75d3> in <module> 6 color = data['cohens_d'].map(lambda x: 'r' if x >= 0 else 'b') 7 alpha = data['adjusted_pval'].map(lambda x: 1.0 if x < 0.1 else 0.25) ----> 8 axs.scatter(data['cohens_d'], data['subsystem'], c=color, alpha=alpha) 9 axs.set_xlabel("Cohen's d") ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/__init__.py in inner(ax, data, *args, **kwargs) 1445 def inner(ax, *args, data=None, **kwargs): 1446 if data is None: -> 1447 return func(ax, *map(sanitize_sequence, args), **kwargs) 1448 1449 bound = new_sig.bind(ax, *args, **kwargs) ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/cbook/deprecation.py in wrapper(*inner_args, **inner_kwargs) 409 else deprecation_addendum, 410 **kwargs) --> 411 return func(*inner_args, **inner_kwargs) 412 413 return wrapper ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/axes/_axes.py in scatter(self, x, y, s, c, marker, cmap, norm, vmin, vmax, alpha, linewidths, verts, edgecolors, plotnonfinite, **kwargs) 4493 offsets=offsets, 4494 transOffset=kwargs.pop('transform', self.transData), -> 4495 alpha=alpha 4496 ) 4497 collection.set_transform(mtransforms.IdentityTransform()) ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/collections.py in __init__(self, paths, sizes, **kwargs) 951 """ 952 --> 953 super().__init__(**kwargs) 954 self.set_paths(paths) 955 self.set_sizes(sizes) ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/cbook/deprecation.py in wrapper(*inner_args, **inner_kwargs) 409 else deprecation_addendum, 410 **kwargs) --> 411 return func(*inner_args, **inner_kwargs) 412 413 return wrapper ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/collections.py in __init__(self, edgecolors, facecolors, linewidths, linestyles, capstyle, joinstyle, antialiaseds, offsets, transOffset, norm, cmap, pickradius, hatch, urls, offset_position, zorder, **kwargs) 211 212 self._path_effects = None --> 213 self.update(kwargs) 214 self._paths = None 215 ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/artist.py in update(self, props) 996 raise AttributeError(f"{type(self).__name__!r} object " 997 f"has no property {k!r}") --> 998 ret.append(func(v)) 999 if ret: 1000 self.pchanged() ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/collections.py in set_alpha(self, alpha) 832 def set_alpha(self, alpha): 833 # docstring inherited --> 834 super().set_alpha(alpha) 835 self._update_dict['array'] = True 836 self._set_facecolor(self._original_facecolor) ~/miniconda3/envs/compass/lib/python3.6/site-packages/matplotlib/artist.py in set_alpha(self, alpha) 928 """ 929 if alpha is not None and not isinstance(alpha, Number): --> 930 raise TypeError('alpha must be a float or None') 931 self._alpha = alpha 932 self.pchanged() TypeError: alpha must be a float or None
I meet the same error, do you have find a solution?
I found the cause of this error! actually you should set parameter "s=alpha" instead of "alpha=alpha", and you will get the same plot as the tutorial
Thank you for the great software!
When I replicated 2E, it showed an error as follows. Other pictures were good. Would the team give some tips?