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YosefLab / mrvi-reproducibility

Nextflow pipeline for MrVI pipelines
BSD 3-Clause "New" or "Revised" License
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remove tsne #39

Closed PierreBoyeau closed 1 year ago

PierreBoyeau commented 1 year ago

Based on our discussion, it seems like TSNECUDA can cause OOM issues. This PR removes all references to this package, and just pymde and pca are run as dimension reduction tools