I am attempting to install localcolabfold on a cluster; however, after executing "bash install_colabbatch_linux.sh" I get the following error message roughly a couple of minutes into the installation:
ERROR: Could not find a version that satisfies the requirement pandas<2.0.0,>=1.3.4 (from colabfold) (from versions: 2.1.0+computecanada, 2.1.1+computecanada, 2.2.1+computecanada, 2.2.2+computecanada)
ERROR: No matching distribution found for pandas<2.0.0,>=1.3.4
After this error message, the installation continues for a bit but gets stuck here:
I have tried different virtual environments, with different python versions, as well as installing packages prior to installation, but the error still persists. The first error message seems to indicate that my system doesn't seem to have the right version for pandas, so I tried "python3.11 -m pip install pandas==1.5.3", which managed to install pandas 1.5.3 successfully in my venv. However, after running "bash install_colabbatch_linux.sh" again the error message pops up again. Is there a way to resolve this issue?
Hello all,
I am attempting to install localcolabfold on a cluster; however, after executing "bash install_colabbatch_linux.sh" I get the following error message roughly a couple of minutes into the installation:
ERROR: Could not find a version that satisfies the requirement pandas<2.0.0,>=1.3.4 (from colabfold) (from versions: 2.1.0+computecanada, 2.1.1+computecanada, 2.2.1+computecanada, 2.2.2+computecanada) ERROR: No matching distribution found for pandas<2.0.0,>=1.3.4
After this error message, the installation continues for a bit but gets stuck here:
Collecting matplotlib==3.1.3 (from colabfold[alphafold]) Using cached matplotlib-3.1.3.tar.gz (40.9 MB) Preparing metadata (setup.py)
I have tried different virtual environments, with different python versions, as well as installing packages prior to installation, but the error still persists. The first error message seems to indicate that my system doesn't seem to have the right version for pandas, so I tried "python3.11 -m pip install pandas==1.5.3", which managed to install pandas 1.5.3 successfully in my venv. However, after running "bash install_colabbatch_linux.sh" again the error message pops up again. Is there a way to resolve this issue?