YuLab-SMU / ChIPseeker

:dart: ChIP peak Annotation, Comparison and Visualization
https://onlinelibrary.wiley.com/share/author/GYJGUBYCTRMYJFN2JFZZ?target=10.1002/cpz1.585
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Too small values for Peak Count Frequency #180

Open amizeranschi opened 2 years ago

amizeranschi commented 2 years ago

How are the y values (Peak Count Frequency) computed for the various peak profile plots? The shape of the curves looks like what I would expect for my samples, but the y values seem much too small and this seems quite confusing.

Are these values normalized somehow? How should they be interpreted?

For example, for a y value of 0.0004, does this mean that only 0.04 from the genes in the genome had peaks at their TSS?