Open Nelson-Gon opened 2 years ago
DOSE
Hello,
I was looking at setReadable and was happy to note that this exists and works well for conversion to gene symbols. I think sometimes it may be necessary to convert to an ensembl ID instead and it would be great if there were support for this.
setReadable
Looking at https://github.com/YuLab-SMU/DOSE/blob/20c57bc217fa9aa17dc642ec047bd80a1848efe5/R/setReadable.R#L53, it seems EXTID2NAME only currently does keytype -> gene symbol conversion.
EXTID2NAME
I envision this would consist of a switch and perhaps an extra argument requesting for the target conversion.
Thank you,
NelsonGon
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DOSE
Hello,
I was looking at
setReadable
and was happy to note that this exists and works well for conversion to gene symbols. I think sometimes it may be necessary to convert to an ensembl ID instead and it would be great if there were support for this.Looking at https://github.com/YuLab-SMU/DOSE/blob/20c57bc217fa9aa17dc642ec047bd80a1848efe5/R/setReadable.R#L53, it seems
EXTID2NAME
only currently does keytype -> gene symbol conversion.I envision this would consist of a switch and perhaps an extra argument requesting for the target conversion.
Thank you,
NelsonGon