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YuLab-SMU / HDO.db

A new version of DO.db
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Install HDO.db in R/4.1.0 #15

Open kasayadior opened 1 week ago

kasayadior commented 1 week ago

Hi, I am using a rstudio server with R/4.1.0. And I ran into a problem installing HDO.db for DOSE:

BiocManager::install("HDO.db") 'getOption("repos")' replaces Bioconductor standard repositories, see 'help("repositories", package = "BiocManager")' for details. Replacement repositories: CRAN: https://cloud.r-project.org Bioconductor version 3.13 (BiocManager 1.30.22), R 4.1.0 (2021-05-18) Installing package(s) 'HDO.db' package ‘HDO.db’ is not available for Bioconductor version '3.13'

This is a required dependency for DOSE/enrichplot/clusterProfiler and I can't upgrade R to a new version for the rstudio server. Please help. Thank you.

huerqiang commented 1 week ago

You can download and install this package locally: HDO.db_0.99.2.tar.gz