Open ZWanBing opened 1 year ago
The API was changed, new: https://www.kegg.jp/kegg/rest/keggapi.html that is right: r$> clusterProfiler:::kegg_list function (db, species = NULL) { if (db == "pathway") { url <- paste("https://rest.kegg.jp/list", db, species, sep = "/") } else { url <- paste("https://rest.kegg.jp/list", db, sep = "/") } kegg_rest(url) } eg: https://rest.kegg.jp/list/pathway/mmu
Dear authors, please pay attention to this issue:![image](https://user-images.githubusercontent.com/33241734/236374616-68c5966a-cd6b-4873-985c-a4be444a57e7.png)
I have already installed the newest createKEGGdb and clusterProfiler