Closed amizeranschi closed 1 year ago
I am getting the same error about warning_wrap
This issue was caused by the newest ggplot2 (3.4.0). There are some methods to solve the problem.
First method
R
(> 4.2) and Bioconductor
(3.16 version)ggtree
(>=3.6.1), the latest patch has been submitted to Bioconductor, and this version might be online tomorrow.Second method
Third method
github
(development) version by remotes::install_github('YuLab-SMU/ggtree')
if you know what you are doing.Had same issue on Linux Centos and Debian OS. I had to install ggtree from github: install.packages("devtools") devtools::install_github("YuLab-SMU/ggtree")
I can confirm the third method (dev version) with the latest ggplot2 (3.4.0) works fine. Thanks!
Many thanks to everyone for your replies!
I successfully used the second method on my local home and also the third method on a server on which I couldn't upgrade R above R 4.1.0. Thank you so much ! You saved me for my teaching courses tomorrow !
@xiangpin Thank you! I tried the first method and it works for me.
Error in get(x, envir = ns, inherits = FALSE) : object 'warning_wrap' not found Error: unable to load R code in package ‘ggtree’ Execution halted
im getting this error in installing chipseeker as well as in ggtree installation. im not understanding how to rectify this, above 2 solutions are not working from me. R version is 4.3.1
Hi,
I am unable to install clusterProfiler due to missing dependency ggtree, which fails to install. I am providing the full output below, which includes the version of R that I use and the packages I'm trying to install.
Please let me know how I can get things to install properly.