No "read.r8s"

[WXwangxia]

dear author, i wanna visualize the result of r8s, which is a program for analysis of rates of evolution. Fortunately, i found the ggtree package that could realize it. but when i use it, something was wrong. below that:

Describe my issue

setwd("C:/Users/wx/Desktop/forBEAST/beast_44digital/rename_nex") library(ggtree) read.r8s("44re.out") 错误于read.r8s("44re.out"): 没有"read.r8s"这个函数

Could someone tell me how to solve this problem please? i will appreciate it from the bottom of my heart!!

best wishes

[WXwangxia]

HAHAHA, i found this "read.r8s" package, though error in parsing the out file. a little happy~~~

require(treeio) 载入需要的程序包：treeio treeio v1.28.0 For help: https://yulab-smu.top/treedata-book/

If you use the ggtree package suite in published research, please cite the appropriate paper(s):

LG Wang, TTY Lam, S Xu, Z Dai, L Zhou, T Feng, P Guo, CW Dunn, BR Jones, T Bradley, H Zhu, Y Guan, Y Jiang, G Yu. treeio: an R package for phylogenetic tree input and output with richly annotated and associated data. Molecular Biology and Evolution. 2020, 37(2):599-603. doi: 10.1093/molbev/msz240

Guangchuang Yu, David Smith, Huachen Zhu, Yi Guan, Tommy Tsan-Yuk Lam. ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data. Methods in Ecology and Evolution. 2017, 8(1):28-36. doi:10.1111/2041-210X.12628 Guangchuang Yu. Data Integration, Manipulation and Visualization of Phylogenetic Trees (1st edition). Chapman and Hall/CRC. 2022, doi:10.1201/9781003279242

y = read.r8s("44re.out") 错误于read.r8s("44re.out"): fail to parse the file...

[WXwangxia]

44re_output.log Could someone please help check why the result file of r8s cannot be parsed by read.r8s? thanks very much!!!