but while trying to load the RAxML_bootstrap.pinA.output using read.raxml() getting this error. This file is being read correctly by IQtree online server.
read.raxml("RAxML_bootstrap.pinA.output")
Error in `[[<-.multiPhylo`(`*tmp*`, i, value = NULL) :
trying to assign an object not of class "phylo" into an object of class "multiPhylo".
I aligned protein sequences with
raxml -T 32 -s sequences.aln -n pinA.output -m PROTGAMMABLOSUM62 -f d -b 1 -N 100 -p 1 -dbut while trying to load the
RAxML_bootstrap.pinA.outputusingread.raxml()getting this error. This file is being read correctly by IQtree online server.