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YuLab-SMU / treeio

:seedling: Base Classes and Functions for Phylogenetic Tree Input and Output
https://yulab-smu.top/treedata-book/
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treeio_1.22.0 not found in https://bioconductor.org/packages/3.15 #94

Closed nick-youngblut closed 1 year ago

nick-youngblut commented 1 year ago

I'm trying to publish my Shiny app (which includes treeio) to Posit Connect. I'm using treeio v1.22.0, and so rsconnect::deployApp() is attempting to retrieve that version of the package:

[Connect] 2023/01/10 00:16:56.226994671 curl: (22) The requested URL returned error: 404
[Connect] 2023/01/10 00:16:56.227020008 curl: HTTP 404 https://bioconductor.org/packages/3.15/bioc/src/contrib/Archive/treeio/treeio_1.22.0.tar.gz

...but only v1.20.0 and v1.20.1 are present at the url: https://bioconductor.org/packages/3.15/bioc/src/contrib/Archive/treeio/

  1. Do you know why v1.22.0 isn't present?
  2. Would it be possible to add v1.22.0?
nick-youngblut commented 1 year ago

I see that this is due to a change from bioconductor 3.15 to 3.16. Everything always seems more difficult with bioconductor 😞