Hi,
I'm working with QTL-seq pipeline and have successfully finished the analysis using parent 1. However, when I tried to redo the analysis using parent 2, it always stopped in the delta SNP calculation step. After I investigate, there might be an issue with BAM file for parent 2 which is too small and not reasonable. I have tried to use a new copy of the fastq file of parent 2 but still results in the same error.
Could anyone help me with this?
Hi, I'm working with QTL-seq pipeline and have successfully finished the analysis using parent 1. However, when I tried to redo the analysis using parent 2, it always stopped in the delta SNP calculation step. After I investigate, there might be an issue with BAM file for parent 2 which is too small and not reasonable. I have tried to use a new copy of the fastq file of parent 2 but still results in the same error. Could anyone help me with this?
Thanks!