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YuanTian1991 / ChAMP

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ChAMP : myNorm <- champ.norm() #12

Open JulieC42 opened 4 years ago

JulieC42 commented 4 years ago

Hi, From your doc: https://www.bioconductor.org/packages/release/bioc/vignettes/ChAMP/inst/doc/ChAMP.html#section-installation you have line saying to do: myNorm <- champ.norm()

it says : Error in champ.BMIQ(beta[, x], design.v, sampleID = colnames(beta)[x], : task 1 failed - "could not find function "blc""

-> I have searched on web find solution, I have tried to install RPMM package that caontains 'blc'

I can't make this line: myNorm <- champ.norm()
work .

Any help please?

Many thanks, Regards

wwffyy commented 2 years ago

Have you solved the problem yet？I ran into the same problem and did the same thing. I still haven't solved it. best

howtofindme commented 2 years ago

Hi, From your doc: https://www.bioconductor.org/packages/release/bioc/vignettes/ChAMP/inst/doc/ChAMP.html#section-installation you have line saying to do: myNorm <- champ.norm()

it says : Error in champ.BMIQ(beta[, x], design.v, sampleID = colnames(beta)[x], : task 1 failed - "could not find function "blc""

-> I have searched on web find solution, I have tried to install RPMM package that caontains 'blc'

I can't make this line: myNorm <- champ.norm() work .

Any help please?

Many thanks, Regards

Have you solved the problem yet？I ran into the same problem and did the same thing. I still haven't solved it. good luck

howtofindme commented 2 years ago

Have you solved the problem yet？I ran into the same problem and did the same thing. I still haven't solved it. best

Have you solved the problem yet？I ran into the same problem and did the same thing. I still haven't solved it. good luck