Is it possible to modify the default reference genome version?

YuanTian1991 / ChAMP

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Is it possible to modify the default reference genome version? #3

Open yanglq-bio opened 5 years ago

yanglq-bio commented 5 years ago

hi，The default genomic version seems to be hg19, is there any other way to analyze it using hg38?

YuanTian1991 commented 5 years ago

Sorry that ChAMP can not do that. Because Illumina published only hg19 annotation. If you want to use hg38, you may need to use tools like liftOver to do it.