search

ZELLMECHANIK-DRESDEN / ShapeOut

Shape-Out has been superseded by Shape-Out 2.
https://shapeout.readthedocs.io
GNU General Public License v2.0
5 stars 5 forks source link

Batch mode statistical summary export fails "no valid measurements" despite there are data #268

Closed jarogumulec closed 4 years ago

jarogumulec commented 4 years ago

General information

Steps to reproduce the problem

  1. Open Shapeout
  2. set and apply filter
  3. batch - summary
  4. select folder with data, select channel only, select output file, click Assemble

Data files

not data related

Expected behavior

summary is assembled

Actual behavior

desipte there is data, (All measurements ##), following error message occur, no export is created

Traceback (most recent call last):
File "shapeout\gui\batch.py". lie 193, in OnBatch
ValueError: No valied measireements with current selection!
paulmueller commented 4 years ago

I am labeling this as a question, because I believe that it is not a bug: Please make sure that there are channel (not only reservoir) measurements in the selected folder. I cannot reproduce this issue. What happens if you choose "Channel and Reservoir" instead?

jarogumulec commented 4 years ago

When selecting folder(s) with both channel+reservoir measurements

paulmueller commented 4 years ago

Hmm... What kind of data are in the selected folder. .tdms-files or .rtdc files? Would it be possible for you to upload an example measurement somewhere?

jarogumulec commented 4 years ago

I am using .rtdc files only. I dont think its an issue of files as when I did such export on computers in MPL (while wisiting the lab, worked fine there), but I fail to do the same thing on my work PC in Czechia (so I first thought about an encoding-related problem as in https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut/issues/267).

an example of data here https://filesender.cesnet.cz/?s=download&token=2b6c81a3-eb3f-388c-9347-e17c53366281

paulmueller commented 4 years ago

Turns out that the chip region was stored as Channel instead of channel (lower-case) in the .rtdc files. Shape-Out did not expect such a thing.

paulmueller commented 4 years ago

should be fixed in 1.0.6 https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut/releases/tag/1.0.6