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ZJUFanLab
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bulk2space
a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell expression profiles
GNU General Public License v3.0
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Downstream scRNA UMAP analysis
#22
ninashenker
opened
2 weeks ago
0
Error in Bulk2space "Incompatible dimensions"
#21
martina811
opened
8 months ago
0
How to process the result data
#20
yqkiuo
opened
10 months ago
0
Bulk RNA normalization
#19
emil-furat
opened
1 year ago
0
Potential applications of Bulk2space
#18
AlexUOM
opened
1 year ago
0
Question of the DFRunner
#17
Starlitnightly
closed
1 year ago
0
Questions about input data requirements
#16
Archi6
closed
9 months ago
5
Effect of Irrelevant Bulk RNA-Seq Sample and Selection of Optimal Projects for Test Data
#15
cwarden45
opened
1 year ago
1
Confused about the train/test steps
#14
Bennylikescoding
opened
1 year ago
4
β-VAE algorithm in the paper
#13
wxpbioinfo
opened
1 year ago
1
Question: Scalability
#12
ccruizm
opened
1 year ago
4
the question of "quick start" section
#11
coconutll
closed
1 year ago
2
model.train_df_and_spatial_deconvolution error
#10
zhangqi234
closed
1 year ago
7
Preproccessed PDAC data
#9
AlexUOM
closed
1 year ago
4
Only obtain three cell types such as tumor cell, macrophages and neutrophils from bulk data?
#8
zhangqi234
closed
1 year ago
2
convert bulk transcriptomes into spatially resolved single-cell expression profile
#7
Echoloria
closed
1 year ago
2
v 2.0.0 update
#6
hackerchenzhuo
closed
2 years ago
0
Cannot import CascadeForestClassifier from deepforest
#5
sarah-chapin
closed
2 years ago
2
Cannot locate the bulk2space.py script and directory after installation
#4
loganminhdang
closed
1 year ago
5
Data availability
#3
loganminhdang
closed
2 years ago
6
Need Nvidia driver
#2
millersan
closed
1 year ago
3
No spatial sequence data
#1
liufuyan2016
closed
2 years ago
3