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ZexuanSun / DTF-Drug-Synergy

Codes and data for DTF
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Some problems about the code. #2

Closed ZJMHub closed 2 years ago

ZJMHub commented 2 years ago

Dear Dr. Sun Zexuan I am a post graduate student. I am interested in your DTF model, but I don’t understand some parts of the code very well, and I can’t find the source in the paper. I hope you can answer it. 1628777919(1) Can you explain what is the purpose of this code and how its parameters are determined? Hope to get your answer Thank you and regrads

ZexuanSun commented 2 years ago

For this dataset, I get the indices of the missing values using Python. In order to run the algorithm in Matlab, the missing of the P tensor should be set as zero. This part of code is setting the missing part as zeros.

ZJMHub commented 2 years ago

For this dataset, I get the indices of the missing values using Python. In order to run the algorithm in Matlab, the missing of the P tensor should be set as zero. This part of code is setting the missing part as zeros.

Thank you for your reply. At the same time, I also found a problem when I tried to run the matlab code, that is, when the amount of drugs or cell line increases sharply, the memory that needs to be run increases rapidly. Can you have a better and faster solution?

ZexuanSun commented 2 years ago

I am sorry that I do not have a better solution.

ZJMHub commented 2 years ago

I am sorry that I do not have a better solution.

Thank you so much for your help!