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ZhangDengwei / IIBacFinder

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HMM files missing #3

Closed marade closed 7 hours ago

marade commented 8 hours ago

############################## Run class II bacteriocin prediction: ############################## 0%| | 0/1 [00:00<?, ?it/s] Error: File existence/permissions problem in trying to open HMM file /home/ubuntu/IIBacFinder/domains/classII-related.hmm. HMM file /home/ubuntu/IIBacFinder/domains/classII-related.hmm not found (nor an .h3m binary of it) ... Error: File existence/permissions problem in trying to open HMM file /home/ubuntu/IIBacFinder/domains/rule.gene.context.hmm. HMM file /home/ubuntu/IIBacFinder/domains/rule.gene.context.hmm not found (nor an .h3m binary of it)

marade commented 8 hours ago

Also this one: FileNotFoundError: [Errno 2] No such file or directory: '/home/ubuntu/IIBacFinder/domains/curated_domain_description.tsv'

marade commented 7 hours ago

For others who might be looking, I found them here:

https://zenodo.org/records/10996042)