The number of contig in my output file metaMIC_corrected_contigs.fa is significantly fewer than the number of contig in my input fasta file. I wonder if it only contains contigs which were corrected and ignores contigs which passed the test? And how can I get a single fasta file contains all the contig (corrected contigs and contigs passed the test) without duplication?
The number of contig in my output file metaMIC_corrected_contigs.fa is significantly fewer than the number of contig in my input fasta file. I wonder if it only contains contigs which were corrected and ignores contigs which passed the test? And how can I get a single fasta file contains all the contig (corrected contigs and contigs passed the test) without duplication?