ZhenyanLuo / Useful-but-not-important

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Orthofinder error #2

Open Junyan-Lin opened 2 years ago

Junyan-Lin commented 2 years ago

Issue 1: Error in creating diamond database at the begining Solution:remove space and empty line in the protein file should avoid this issue.

Issue 2: Ends at 'a bytes-like object is required, not 'str'' Solution: this is python version issue, update to 3 might solve this issue, and also make sure numpy and scipy have been installed. also can be fixed by updateing orthofinder to the latest version (>=2.5.2

Issue 3: _csv.Error: line contains NUL Solution: Remove diamond and install diamond (>=2.07)