Zimmer-lab imutils issues

Zimmer-lab / imutils

Fork of Ulises' imutils repository. This is the main one the lab should use

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issues

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datareader cant read ndtiff files aber micromanager got interupted during writing process

#71 BenjaminSchaar opened 1 week ago
1
small bugfix

#70 BenjaminSchaar closed 3 weeks ago
0
updated head and tail switch

#69 BenjaminSchaar closed 3 weeks ago
0
final version of head and tail correction for unstable dlc

#68 BenjaminSchaar closed 3 weeks ago
0
created better version for dlc swap head and tail

#67 BenjaminSchaar closed 3 weeks ago
0
added prin t statements for logging

#66 BenjaminSchaar closed 3 weeks ago
0
small bug fix

#65 BenjaminSchaar closed 3 weeks ago
0
small bug fix

#64 BenjaminSchaar closed 3 weeks ago
0
small bug fix

#63 BenjaminSchaar closed 3 weeks ago
0
small bug fix

#62 BenjaminSchaar closed 3 weeks ago
0
small bug fix

#61 BenjaminSchaar closed 3 weeks ago
0
small bug fix

#60 BenjaminSchaar closed 3 weeks ago
0
small bug fix

#59 BenjaminSchaar closed 3 weeks ago
0
small bug fix for DLC correct head and tail switch

#58 BenjaminSchaar closed 3 weeks ago
0
finished script

#57 BenjaminSchaar closed 3 weeks ago
0
added head and tail swap correction script for dlc post processing

#56 BenjaminSchaar closed 3 weeks ago
0
fixed import for datareader

#55 BenjaminSchaar closed 1 month ago
0
Update unet_functions.py

#54 BenjaminSchaar closed 1 month ago
0
fixed import after recent data writer implementation

#53 BenjaminSchaar closed 1 month ago
0
import error in the imfunctions.py

#52 jalajamadhusudhanan opened 1 month ago
0
Extract metadata function

#51 LukasMicroscopy closed 1 month ago
0
removed file that shouldn't be in imutils

#50 BenjaminSchaar closed 1 month ago
0
added sam2 segment files

#49 BenjaminSchaar closed 1 month ago
0
Work on ndtiff writer

#48 Charles-Fieseler-Vienna closed 1 month ago
0
made tiff2avo work for tif file as well

#47 BenjaminSchaar closed 2 months ago
0
tiff2avi bug

#46 BenjaminSchaar closed 2 months ago
0
Fix old bug with time swapping with xy

#45 Charles-Fieseler-Vienna closed 2 months ago
0
Refactor find_contours function to a wrapper function

#44 Charles-Fieseler-Vienna closed 3 months ago
0
Fix breaking change to preserve backwards compatibility

#43 Charles-Fieseler-Vienna closed 3 months ago
0
added description in function header comment

#42 BenjaminSchaar closed 3 months ago
0
Modify function to read ndtiff folder, not just single tif file

#41 Charles-Fieseler-Vienna closed 3 months ago
0
Background subtraction does not need a .btf file

#40 Charles-Fieseler-Vienna closed 3 months ago
0
lukas_reader

#39 BenjaminSchaar closed 3 months ago
0
Add verbosity parameter

#38 Charles-Fieseler-Vienna closed 3 months ago
0
added try:except block for lukas reader

#37 BenjaminSchaar closed 3 months ago
0
Update imfunctions.py

#36 BenjaminSchaar closed 3 months ago
0
added resolved path for tiff2avi

#35 BenjaminSchaar closed 3 months ago
0
Update imfunctions.py

#34 BenjaminSchaar closed 4 months ago
0
prinstatement

#33 BenjaminSchaar closed 4 months ago
0
Update imfunctions.py

#32 BenjaminSchaar closed 4 months ago
0
in tiff2avi

#31 BenjaminSchaar closed 4 months ago
0
redo to ulises ometobigtiff

#30 BenjaminSchaar closed 4 months ago
0
ometobigtiff_lukasreadertest

#29 BenjaminSchaar closed 4 months ago
0
Update imfunctions.py

#28 BenjaminSchaar closed 5 months ago
0
Update imfunctions.py

#27 BenjaminSchaar closed 5 months ago
0
Update imfunctions.py

#26 BenjaminSchaar closed 5 months ago
0
itamars ome2bigtiff with lukas reader

#25 BenjaminSchaar closed 5 months ago
0
Update imfunctions.py

#24 BenjaminSchaar closed 5 months ago
0
Update imfunctions.py

#23 BenjaminSchaar closed 5 months ago
0
Update imfunctions.py

#22 BenjaminSchaar closed 5 months ago
0