fastp writing large amounts of data to STDOUT

Zymo-Research / aladdin-shotgun

MIT License

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fastp writing large amounts of data to STDOUT #103

Closed zxl124 closed 2 months ago

zxl124 commented 3 months ago

fastp output is currently piped through STDOUT to gizp. This creates a problem that all these outputs are written to .nextflow.log and CloudWatch logs on AWS, which results in large unnecessary costs.