fastp would hang forever when one of PE FASTQ files are truncated

Zymo-Research / aladdin-shotgun

MIT License

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fastp would hang forever when one of PE FASTQ files are truncated #107

Closed zxl124 closed 5 months ago

zxl124 commented 5 months ago

Instead of erroring, fastp would just hang forever, resulting in process time-out, then retry, same result, repeat. This is due to a known fastp bug in earlier versions.