add new version of the sourmash database and the default kmer size to 31. The main difference between the old and new database is that the new one uses a newer version of the GTDB database (214) and at the "representative genomes" level instead of at the "all genomes" level to increase performance. Because of this, changing kmer size to 31 would hopefully maintain the sensitivity.
add new version of the sourmash database and the default kmer size to 31. The main difference between the old and new database is that the new one uses a newer version of the GTDB database (214) and at the "representative genomes" level instead of at the "all genomes" level to increase performance. Because of this, changing kmer size to 31 would hopefully maintain the sensitivity.